Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BJEKOOGD_27 | 47127 | 48707 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BJEKOOGD_118 | 588 | 765 | Col(KPHS6) | 178 / 178 | 100.00 | NC016841 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJEKOOGD_11 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_22 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_27 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_28 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_29 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_30 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_31 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_32 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_33 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_34 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_35 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_36 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_37 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_38 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_39 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_40 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_41 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_42 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_43 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_44 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_45 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_46 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_47 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_48 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_49 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_50 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_51 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_52 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_53 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_54 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_55 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_56 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_57 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_58 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_59 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_60 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_61 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_62 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_63 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_64 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_65 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_66 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_67 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_68 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_69 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_70 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_71 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_72 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_73 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_74 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_75 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_76 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_77 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_78 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_79 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_80 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_81 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_82 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_83 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_84 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_85 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_87 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_88 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_89 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_90 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_91 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_92 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_93 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_94 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_95 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_96 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_97 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_98 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_100 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_101 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_102 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_103 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_104 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_105 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_106 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_107 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_108 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_109 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_110 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_111 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_112 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_113 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_114 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_115 | 1.0 | 0.0 | 1.0 |
| BJEKOOGD_116 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_117 | 0.0 | 1.0 | 0.0 |
| BJEKOOGD_123 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BJEKOOGD_46 | 38494 | 53237 | False | Siphoviridae | VOG5096, |
Phigaro v2.4.0 (Database: Jan. 2024 release)