Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OOOIFGAO_103 | 33915 | 35889 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OOOIFGAO_103 | 33915 | 35840 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OOOIFGAO_103 | 33918 | 35840 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OOOIFGAO_1 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_3 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_4 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_5 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_6 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_7 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_8 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_9 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_10 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_11 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_12 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_13 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_14 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_15 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_16 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_17 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_18 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_19 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_20 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_21 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_22 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_23 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_24 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_25 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_26 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_27 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_28 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_29 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_30 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_31 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_32 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_33 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_34 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_35 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_36 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_37 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_38 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_39 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_40 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_41 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_42 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_43 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_44 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_45 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_46 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_47 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_48 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_49 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_50 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_51 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_52 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_53 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_54 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_55 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_56 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_57 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_58 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_59 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_60 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_61 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_62 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_63 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_64 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_65 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_66 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_67 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_68 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_69 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_70 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_71 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_72 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_73 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_74 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_75 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_76 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_77 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_78 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_79 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_80 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_81 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_82 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_83 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_84 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_85 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_86 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_87 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_88 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_89 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_91 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_92 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_93 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_94 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_95 | 1.0 | 0.0 | 1.0 |
| OOOIFGAO_96 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_97 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_98 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_99 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_101 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_102 | 0.0 | 1.0 | 0.0 |
| OOOIFGAO_103 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OOOIFGAO_6 | 86925 | 92186 | False | Unknown | VOG4755, |
| OOOIFGAO_37 | 13216 | 20760 | False | Siphoviridae | VOG7238, |
| OOOIFGAO_54 | 190637 | 197023 | False | Unknown | VOG8840, |
Phigaro v2.4.0 (Database: Jan. 2024 release)