Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FILMEFIK_100 | 35739 | 37712 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FILMEFIK_100 | 35739 | 37664 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FILMEFIK_100 | 35742 | 37664 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FILMEFIK_130 | 1839 | 259 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FILMEFIK_1 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_3 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_4 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_5 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_6 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_7 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_8 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_9 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_10 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_11 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_12 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_13 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_14 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_15 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_16 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_17 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_18 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_19 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_20 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_21 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_22 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_23 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_24 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_25 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_26 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_27 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_28 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_29 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_30 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_31 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_32 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_33 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_34 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_35 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_36 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_37 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_38 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_39 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_40 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_41 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_42 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_43 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_44 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_45 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_46 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_47 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_48 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_49 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_51 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_52 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_53 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_54 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_55 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_56 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_57 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_58 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_59 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_61 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_62 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_63 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_64 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_65 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_66 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_67 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_68 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_69 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_70 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_71 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_72 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_73 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_74 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_75 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_76 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_77 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_78 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_79 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_80 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_81 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_82 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_83 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_84 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_85 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_86 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_87 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_88 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_89 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_90 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_91 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_92 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_93 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_94 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_95 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_96 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_97 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_98 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_99 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_100 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_101 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_102 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_103 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_104 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_105 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_106 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_107 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_109 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_110 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_111 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_112 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_113 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_114 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_115 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_116 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_117 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_118 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_119 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_120 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_121 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_122 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_123 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_124 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_125 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_126 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_127 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_128 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_129 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_130 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_131 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_132 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_133 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_134 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_135 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_136 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_137 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_138 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_139 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_140 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_141 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_142 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_143 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_144 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_145 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_146 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_147 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_148 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_149 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_150 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_151 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_152 | 1.0 | 0.0 | 1.0 |
| FILMEFIK_153 | 0.0 | 1.0 | 0.0 |
| FILMEFIK_154 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)