Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HGBGCOMN_66 | 9582 | 10547 | CfxA4 | ARO:3003005 | CfxA4 | 100.00 | 100.00 | AY769933.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HGBGCOMN_66 | 9582 | 10547 | cfxA4 | Unknown Beta-lactam | 100.00 | 100.00 | AY769933 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HGBGCOMN_66 | 9585 | 10547 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | EXACTX | 100.00 | 100.00 | WP_057280848.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HGBGCOMN_1 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_2 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_3 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_4 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_5 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_6 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_7 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_8 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_9 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_10 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_11 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_12 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_13 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_14 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_15 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_16 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_17 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_18 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_19 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_20 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_21 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_22 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_23 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_24 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_25 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_26 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_27 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_28 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_29 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_30 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_31 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_32 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_33 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_34 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_35 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_36 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_37 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_38 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_39 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_40 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_41 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_42 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_43 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_44 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_45 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_46 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_47 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_48 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_49 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_50 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_51 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_52 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_53 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_54 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_55 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_56 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_57 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_58 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_59 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_60 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_61 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_62 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_63 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_64 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_65 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_66 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_67 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_68 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_69 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_70 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_71 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_72 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_73 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_74 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_75 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_76 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_77 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_78 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_79 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_80 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_81 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_83 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_84 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_85 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_86 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_87 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_88 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_89 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_90 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_91 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_92 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_93 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_94 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_95 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_96 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_97 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_98 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_99 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_100 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_101 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_102 | 1.0 | 0.0 | 1.0 |
| HGBGCOMN_103 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_104 | 0.0 | 1.0 | 0.0 |
| HGBGCOMN_105 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HGBGCOMN_7 | 113490 | 122742 | False | Siphoviridae | VOG4841, |
| HGBGCOMN_15 | 74454 | 82641 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)