Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BAHCLCAC_21 | 28796 | 30721 | tet(Q) | ARO:3000191 | tet(Q) | 97.35 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BAHCLCAC_21 | 28796 | 30721 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.04 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BAHCLCAC_21 | 28799 | 30721 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.35 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BAHCLCAC_67 | 955 | 1535 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BAHCLCAC_1 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_2 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_3 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_4 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_5 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_6 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_7 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_8 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_9 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_10 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_11 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_12 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_13 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_14 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_15 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_16 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_17 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_18 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_19 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_20 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_21 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_22 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_23 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_24 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_25 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_26 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_27 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_28 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_29 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_30 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_31 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_32 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_33 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_34 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_35 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_36 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_37 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_38 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_39 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_40 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_41 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_42 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_43 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_44 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_45 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_46 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_47 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_48 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_49 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_50 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_51 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_52 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_53 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_54 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_55 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_56 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_57 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_58 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_59 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_60 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_61 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_62 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_64 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_65 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_66 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_67 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_68 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_69 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_70 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_71 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_72 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_73 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_74 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_75 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_76 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_77 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_78 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_79 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_80 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_81 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_82 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_83 | 1.0 | 0.0 | 1.0 |
| BAHCLCAC_84 | 0.0 | 1.0 | 0.0 |
| BAHCLCAC_85 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BAHCLCAC_24 | 53225 | 62421 | False | Unknown | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)