Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CPBBOJMJ_24 | 70581 | 72527 | tet(Q) | ARO:3000191 | tet(Q) | 96.39 | 98.63 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CPBBOJMJ_24 | 70581 | 72493 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CPBBOJMJ_24 | 70581 | 72494 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.37 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CPBBOJMJ_61 | 29137 | 27557 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CPBBOJMJ_1 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_2 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_3 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_4 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_5 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_6 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_7 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_8 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_9 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_10 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_11 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_12 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_13 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_14 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_15 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_16 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_17 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_18 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_19 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_20 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_21 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_22 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_23 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_24 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_25 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_26 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_27 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_28 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_29 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_30 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_31 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_32 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_33 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_34 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_35 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_36 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_37 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_38 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_39 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_40 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_41 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_42 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_43 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_44 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_45 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_46 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_47 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_48 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_49 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_50 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_51 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_52 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_53 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_54 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_55 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_56 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_57 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_58 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_59 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_60 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_61 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_62 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_63 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_64 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_65 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_66 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_67 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_68 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_69 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_70 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_71 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_72 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_73 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_74 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_75 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_76 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_77 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_78 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_79 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_80 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_81 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_82 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_83 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_84 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_85 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_86 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_87 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_88 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_89 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_90 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_91 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_92 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_93 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_94 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_95 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_96 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_97 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_98 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_99 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_100 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_102 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_103 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_104 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_105 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_106 | 0.0 | 1.0 | 0.0 |
| CPBBOJMJ_107 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_108 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_109 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_110 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_111 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_112 | 1.0 | 0.0 | 1.0 |
| CPBBOJMJ_114 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)