Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NCELMIHK_3 | 85303 | 85503 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NCELMIHK_1 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_2 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_3 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_4 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_5 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_6 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_7 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_8 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_9 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_10 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_11 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_12 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_13 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_14 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_15 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_16 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_17 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_18 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_19 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_20 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_21 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_22 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_23 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_24 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_25 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_26 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_27 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_28 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_29 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_30 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_31 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_32 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_33 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_34 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_35 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_36 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_37 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_38 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_39 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_40 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_41 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_42 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_43 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_44 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_45 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_46 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_47 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_48 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_49 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_50 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_51 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_52 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_53 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_54 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_55 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_56 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_57 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_59 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_60 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_61 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_62 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_63 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_64 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_65 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_66 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_67 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_69 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_70 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_71 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_72 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_73 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_74 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_75 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_76 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_78 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_79 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_80 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_81 | 1.0 | 0.0 | 1.0 |
| NCELMIHK_82 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_83 | 0.0 | 1.0 | 0.0 |
| NCELMIHK_84 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NCELMIHK_33 | 82354 | 110313 | False | Myoviridae | VOG4691, |
| NCELMIHK_55 | 97207 | 132194 | False | Siphoviridae | VOG9667, |
Phigaro v2.4.0 (Database: Jan. 2024 release)