Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 8 | 0 | 0 | 8.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ECIAALIL_3 | 133136 | 133936 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| ECIAALIL_3 | 131691 | 132830 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| ECIAALIL_3 | 130356 | 131492 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| ECIAALIL_3 | 129317 | 130180 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| ECIAALIL_4 | 56385 | 57275 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| ECIAALIL_6 | 20983 | 22188 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| ECIAALIL_59 | 4990 | 6963 | tet(Q) | ARO:3000191 | tet(Q) | 97.41 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ECIAALIL_3 | 133136 | 133936 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| ECIAALIL_3 | 130356 | 131522 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| ECIAALIL_59 | 4990 | 6915 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.74 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ECIAALIL_3 | 129320 | 130180 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| ECIAALIL_4 | 56388 | 57275 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| ECIAALIL_3 | 130359 | 131522 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| ECIAALIL_6 | 20482 | 20958 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 100.00 | 93.53 | WP_004308783.1 |
| ECIAALIL_3 | 131694 | 132830 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| ECIAALIL_3 | 133136 | 133933 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| ECIAALIL_6 | 20986 | 22188 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| ECIAALIL_59 | 4993 | 6915 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.38 | 100.00 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ECIAALIL_1 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_2 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_3 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_4 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_5 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_6 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_7 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_8 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_9 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_10 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_11 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_12 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_13 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_14 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_15 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_16 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_17 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_18 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_19 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_20 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_21 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_22 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_23 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_24 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_25 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_26 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_27 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_28 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_29 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_30 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_31 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_32 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_33 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_34 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_35 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_36 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_37 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_38 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_39 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_40 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_41 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_42 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_43 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_44 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_45 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_46 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_47 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_48 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_49 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_50 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_51 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_52 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_53 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_54 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_55 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_56 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_57 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_58 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_59 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_60 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_61 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_62 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_63 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_64 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_65 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_66 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_67 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_68 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_69 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_70 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_71 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_72 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_73 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_75 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_76 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_77 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_78 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_79 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_80 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_81 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_82 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_83 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_84 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_85 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_86 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_87 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_88 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_89 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_90 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_91 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_92 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_93 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_94 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_95 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_96 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_97 | 0.0 | 1.0 | 0.0 |
| ECIAALIL_98 | 1.0 | 0.0 | 1.0 |
| ECIAALIL_99 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ECIAALIL_10 | 26171 | 37451 | False | Siphoviridae | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)