Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EPFDKDED_89 | 130660 | 131550 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EPFDKDED_15 | 8446 | 9396 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| EPFDKDED_15 | 8446 | 9396 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| EPFDKDED_15 | 8446 | 9396 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| EPFDKDED_15 | 8446 | 9396 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EPFDKDED_89 | 130663 | 131550 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| EPFDKDED_15 | 8445 | 9398 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EPFDKDED_1 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_2 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_3 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_4 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_5 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_6 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_7 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_8 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_9 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_10 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_11 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_12 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_13 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_14 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_15 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_16 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_17 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_18 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_19 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_20 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_21 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_22 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_23 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_24 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_25 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_26 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_27 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_28 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_29 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_30 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_31 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_32 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_33 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_34 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_35 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_36 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_37 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_38 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_39 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_40 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_41 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_42 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_43 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_44 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_45 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_46 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_47 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_48 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_49 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_50 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_51 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_52 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_53 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_54 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_55 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_56 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_57 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_58 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_59 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_60 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_61 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_62 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_63 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_65 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_66 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_67 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_68 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_69 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_70 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_71 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_72 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_73 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_74 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_75 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_76 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_77 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_78 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_79 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_80 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_81 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_82 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_83 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_84 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_85 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_86 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_87 | 1.0 | 0.0 | 1.0 |
| EPFDKDED_88 | 0.0 | 1.0 | 0.0 |
| EPFDKDED_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)