Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFNNEEEG_26 | 46455 | 48374 | tet(O) | ARO:3000190 | tet(O) | 99.22 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PFNNEEEG_26 | 46455 | 48374 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.69 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFNNEEEG_26 | 46458 | 48374 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.53 | 100.00 | WP_044666383.1 |
| PFNNEEEG_11 | 92966 | 93166 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PFNNEEEG_1 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_2 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_3 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_4 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_5 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_6 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_7 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_9 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_10 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_11 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_12 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_13 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_15 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_16 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_17 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_18 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_19 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_21 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_22 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_23 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_24 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_25 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_26 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_27 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_28 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_29 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_30 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_31 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_32 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_33 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_34 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_35 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_36 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_37 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_38 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_39 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_40 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_41 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_42 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_43 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_44 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_45 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_46 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_47 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_48 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_49 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_50 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_51 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_52 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_53 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_54 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_55 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_56 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_57 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_58 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_59 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_60 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_61 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_62 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_63 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_64 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_65 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_66 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_67 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_68 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_69 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_70 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_71 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_72 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_73 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_74 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_75 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_76 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_77 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_78 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_79 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_80 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_81 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_82 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_83 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_84 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_85 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_86 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_87 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_89 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_90 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_91 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_92 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_93 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_94 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_95 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_96 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_97 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_98 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_99 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_100 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_101 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_102 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_103 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_104 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_105 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_106 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_107 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_108 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_109 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_110 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_111 | 0.0 | 1.0 | 0.0 |
| PFNNEEEG_112 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_113 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_114 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_115 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_116 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_117 | 1.0 | 0.0 | 1.0 |
| PFNNEEEG_118 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)