Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FBOMIEKL_83 | 9220 | 11145 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| FBOMIEKL_33 | 2969 | 3877 | CblA-1 | ARO:3002999 | CblA-1 | 97.97 | 102.03 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FBOMIEKL_83 | 9220 | 11145 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FBOMIEKL_83 | 9220 | 11142 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| FBOMIEKL_33 | 2990 | 3877 | cblA | CblA family class A beta-lactamase | BLASTX | 97.97 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FBOMIEKL_1 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_2 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_3 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_4 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_5 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_6 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_7 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_8 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_9 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_10 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_11 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_12 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_13 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_14 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_15 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_16 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_17 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_18 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_19 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_20 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_21 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_22 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_23 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_24 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_25 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_26 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_27 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_28 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_29 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_30 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_31 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_32 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_33 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_34 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_35 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_36 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_37 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_38 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_39 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_40 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_41 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_42 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_43 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_44 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_45 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_46 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_47 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_48 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_49 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_50 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_51 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_52 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_53 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_54 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_55 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_56 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_57 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_58 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_59 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_60 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_61 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_62 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_64 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_65 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_66 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_67 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_68 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_69 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_70 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_71 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_72 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_74 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_75 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_76 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_77 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_78 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_79 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_80 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_81 | 1.0 | 0.0 | 1.0 |
| FBOMIEKL_82 | 0.0 | 1.0 | 0.0 |
| FBOMIEKL_83 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FBOMIEKL_33 | 101670 | 114737 | False | Unknown | VOG4572, |
| FBOMIEKL_77 | 58597 | 70363 | False | Unknown | VOG4690, |
Phigaro v2.4.0 (Database: Jan. 2024 release)