Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJEJHOAE_91 | 1881 | 3827 | tet(Q) | ARO:3000191 | tet(Q) | 97.34 | 98.63 | Z21523.1 |
| BJEJHOAE_128 | 160 | 1125 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BJEJHOAE_128 | 160 | 1125 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| BJEJHOAE_128 | 160 | 1125 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| BJEJHOAE_128 | 160 | 1125 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| BJEJHOAE_128 | 160 | 1125 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| BJEJHOAE_91 | 1881 | 3793 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.16 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJEJHOAE_128 | 160 | 1122 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| BJEJHOAE_91 | 1881 | 3794 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.43 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJEJHOAE_1 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_2 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_3 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_4 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_5 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_6 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_7 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_8 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_9 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_10 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_11 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_12 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_13 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_14 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_15 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_16 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_17 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_18 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_19 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_20 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_21 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_22 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_23 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_25 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_26 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_27 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_28 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_29 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_30 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_31 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_32 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_33 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_34 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_35 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_36 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_37 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_38 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_39 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_40 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_41 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_42 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_44 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_45 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_46 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_47 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_48 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_49 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_50 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_51 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_52 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_53 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_54 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_55 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_56 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_57 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_58 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_59 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_60 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_61 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_62 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_63 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_64 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_65 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_66 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_67 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_68 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_69 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_70 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_71 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_72 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_73 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_74 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_75 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_76 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_77 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_78 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_79 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_80 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_81 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_82 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_83 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_84 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_85 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_86 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_87 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_88 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_89 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_90 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_91 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_92 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_93 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_94 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_95 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_96 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_97 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_98 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_99 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_100 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_101 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_102 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_103 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_104 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_105 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_106 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_107 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_108 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_109 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_110 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_111 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_112 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_113 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_114 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_115 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_116 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_117 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_118 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_119 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_120 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_121 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_122 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_123 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_124 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_125 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_126 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_127 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_128 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_129 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_130 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_131 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_132 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_133 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_134 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_136 | 1.0 | 0.0 | 1.0 |
| BJEJHOAE_137 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_138 | 0.0 | 1.0 | 0.0 |
| BJEJHOAE_139 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BJEJHOAE_84 | 106621 | 119030 | False | Siphoviridae | VOG0749, |
| BJEJHOAE_139 | 111737 | 118283 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)