Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KHICBJJI_59 | 83417 | 84151 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| KHICBJJI_112 | 27449 | 29443 | tet(Q) | ARO:3000191 | tet(Q) | 97.40 | 101.07 | Z21523.1 |
| KHICBJJI_58 | 160 | 1125 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KHICBJJI_58 | 160 | 1125 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| KHICBJJI_58 | 160 | 1125 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| KHICBJJI_58 | 160 | 1125 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| KHICBJJI_58 | 160 | 1125 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| KHICBJJI_59 | 83417 | 84151 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| KHICBJJI_112 | 27483 | 29395 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.16 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KHICBJJI_58 | 160 | 1122 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| KHICBJJI_59 | 83420 | 84151 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| KHICBJJI_112 | 27482 | 29395 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.43 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KHICBJJI_1 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_3 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_4 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_5 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_6 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_7 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_8 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_9 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_10 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_11 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_12 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_13 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_14 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_15 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_16 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_17 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_18 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_19 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_20 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_21 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_22 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_23 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_24 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_25 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_26 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_27 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_28 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_29 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_30 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_31 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_32 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_33 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_34 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_35 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_36 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_37 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_38 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_39 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_40 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_41 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_42 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_43 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_44 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_45 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_46 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_47 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_48 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_49 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_50 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_51 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_52 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_53 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_55 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_56 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_57 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_58 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_59 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_60 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_61 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_62 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_63 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_64 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_65 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_66 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_67 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_68 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_69 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_70 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_71 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_72 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_73 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_74 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_75 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_76 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_77 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_78 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_79 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_80 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_81 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_82 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_83 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_84 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_85 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_86 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_87 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_88 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_89 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_90 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_91 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_92 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_93 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_94 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_95 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_96 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_97 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_98 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_99 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_100 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_101 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_102 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_103 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_104 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_105 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_106 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_107 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_108 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_109 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_110 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_111 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_112 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_113 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_114 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_115 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_116 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_117 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_118 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_119 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_120 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_121 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_122 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_123 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_124 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_125 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_126 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_127 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_128 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_129 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_130 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_131 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_132 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_133 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_134 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_135 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_136 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_137 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_138 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_139 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_140 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_141 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_142 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_143 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_144 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_145 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_146 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_147 | 1.0 | 0.0 | 1.0 |
| KHICBJJI_148 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_149 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_150 | 0.0 | 1.0 | 0.0 |
| KHICBJJI_151 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KHICBJJI_11 | 39991 | 52400 | False | Siphoviridae | VOG0749, |
| KHICBJJI_55 | 59599 | 66145 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)