Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 1 | 0 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ODOAMJBE_2 | 64337 | 66311 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
| ODOAMJBE_1 | 58830 | 59732 | CepA-49 | ARO:3006226 | CepA-49 | 100.00 | 100.00 | NG_050387.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ODOAMJBE_1 | 58830 | 59732 | cepA-49 | Unknown Beta-lactam | 100.00 | 100.00 | U05886 |
| ODOAMJBE_2 | 64337 | 66262 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ODOAMJBE_1 | 58833 | 59732 | cepA-49 | extended-spectrum class A beta-lactamase CepA-49 | ALLELEX | 100.00 | 100.00 | WP_008659027.1 |
| ODOAMJBE_2 | 64340 | 66262 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ODOAMJBE_22 | 74599 | 75792 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| ODOAMJBE_22 | 74599 | 75792 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| ODOAMJBE_22 | 74599 | 75792 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ODOAMJBE_31 | 1186 | 1865 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ODOAMJBE_1 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_2 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_3 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_4 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_5 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_6 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_7 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_8 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_9 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_10 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_11 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_12 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_13 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_14 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_15 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_16 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_17 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_18 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_19 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_20 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_21 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_22 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_23 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_24 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_25 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_26 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_27 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_29 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_30 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_31 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_32 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_33 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_34 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_35 | 1.0 | 0.0 | 1.0 |
| ODOAMJBE_36 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_37 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_38 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_39 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_40 | 0.0 | 1.0 | 0.0 |
| ODOAMJBE_41 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ODOAMJBE_36 | 275766 | 286685 | True | Unknown | VOG8506, |
Phigaro v2.4.0 (Database: Jan. 2024 release)