Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONBFDNAC_109 | 2377 | 3180 | APH(3'')-Ib | ARO:3002639 | APH(3'')-Ib | 99.63 | 100.00 | AF313472.2 |
| ONBFDNAC_109 | 379 | 1200 | APH(3')-Ib | ARO:3002642 | APH(3')-Ib | 94.42 | 100.74 | M20305.1 |
| ONBFDNAC_117 | 85 | 1713 | tet(Q) | ARO:3000191 | tet(Q) | 98.53 | 82.65 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ONBFDNAC_109 | 391 | 1200 | aph(3')-Ib | Kanamycin, Neomycin, Kanamycin, Lividomycin, Paromomycin, Ribostamycin | 99.88 | 99.26 | AJ744860 |
| ONBFDNAC_109 | 1751 | 2377 | aph(6)-Id | Streptomycin | 99.84 | 74.91 | 18676889 |
| ONBFDNAC_117 | 133 | 1715 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.86 | 82.19 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONBFDNAC_109 | 2380 | 3180 | aph(3'')-Ib | aminoglycoside O-phosphotransferase APH(3'')-Ib | EXACTX | 100.00 | 100.00 | WP_001082319.1 |
| ONBFDNAC_109 | 1751 | 2377 | aph(6)-Id | aminoglycoside O-phosphotransferase APH(6)-Id | PARTIALX | 100.00 | 75.18 | WP_000480968.1 |
| ONBFDNAC_109 | 391 | 1197 | aph(3')-Ib | aminoglycoside O-phosphotransferase APH(3')-Ib | BLASTX | 99.63 | 99.26 | WP_011205810.1 |
| ONBFDNAC_71 | 22663 | 23496 | estT | macrolide hydrolase EstT | BLASTX | 98.57 | 99.29 | WP_185148407.1 |
| ONBFDNAC_117 | 133 | 1713 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 98.48 | 82.22 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ONBFDNAC_1 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_2 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_3 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_4 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_5 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_6 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_7 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_8 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_9 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_10 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_11 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_12 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_13 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_14 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_15 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_16 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_17 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_18 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_19 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_20 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_21 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_22 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_23 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_24 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_25 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_26 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_27 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_28 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_29 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_30 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_31 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_32 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_33 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_34 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_35 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_36 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_37 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_38 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_39 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_40 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_41 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_42 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_43 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_44 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_45 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_46 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_47 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_48 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_49 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_50 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_51 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_52 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_53 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_54 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_55 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_56 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_57 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_58 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_59 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_60 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_61 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_62 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_63 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_64 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_65 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_66 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_67 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_68 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_69 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_70 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_71 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_72 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_73 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_74 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_75 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_76 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_77 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_78 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_79 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_80 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_81 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_82 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_83 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_84 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_85 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_86 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_87 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_88 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_89 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_90 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_91 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_92 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_93 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_94 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_95 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_96 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_97 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_98 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_99 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_100 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_101 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_102 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_103 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_105 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_106 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_107 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_108 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_109 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_110 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_111 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_112 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_113 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_114 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_115 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_116 | 0.0 | 1.0 | 0.0 |
| ONBFDNAC_117 | 1.0 | 0.0 | 1.0 |
| ONBFDNAC_118 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ONBFDNAC_23 | 68943 | 81557 | False | Siphoviridae | VOG0720, |
Phigaro v2.4.0 (Database: Jan. 2024 release)