Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| POHGCOAF_79 | 110174 | 112099 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| POHGCOAF_79 | 110174 | 112099 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| POHGCOAF_79 | 110177 | 112099 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| POHGCOAF_100 | 1788 | 2467 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| POHGCOAF_1 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_2 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_3 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_4 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_5 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_6 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_7 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_8 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_9 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_10 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_11 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_12 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_13 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_14 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_15 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_16 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_17 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_18 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_19 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_20 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_21 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_22 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_23 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_24 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_25 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_26 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_27 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_28 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_29 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_30 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_31 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_32 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_33 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_34 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_35 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_36 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_37 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_38 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_39 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_40 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_41 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_42 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_43 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_44 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_45 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_46 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_47 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_48 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_49 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_50 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_51 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_52 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_53 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_54 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_55 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_56 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_57 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_58 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_59 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_60 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_61 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_62 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_63 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_64 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_65 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_66 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_67 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_68 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_69 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_70 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_71 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_72 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_73 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_74 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_75 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_76 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_77 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_78 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_79 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_80 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_81 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_82 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_83 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_84 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_85 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_86 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_87 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_88 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_89 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_90 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_92 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_93 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_94 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_95 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_96 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_97 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_98 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_99 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_100 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_101 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_102 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_103 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_104 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_105 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_106 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_107 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_108 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_109 | 1.0 | 0.0 | 1.0 |
| POHGCOAF_111 | 0.0 | 1.0 | 0.0 |
| POHGCOAF_112 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| POHGCOAF_16 | 133457 | 141342 | False | Unknown | VOG4573, |
| POHGCOAF_38 | 75053 | 84763 | False | Siphoviridae | VOG0749, |
| POHGCOAF_40 | 69717 | 76117 | False | Siphoviridae | VOG4544, |
Phigaro v2.4.0 (Database: Jan. 2024 release)