Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICLENCNL_23 | 21417 | 23336 | tet(O) | ARO:3000190 | tet(O) | 93.74 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ICLENCNL_23 | 21417 | 23336 | tet(O/32/O) | Doxycycline, Tetracycline, Minocycline | 99.58 | 100.00 | AIOQ01000025 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICLENCNL_23 | 21420 | 23336 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 94.05 | 100.00 | WP_012669445.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ICLENCNL_1 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_2 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_3 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_4 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_5 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_6 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_7 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_8 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_9 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_10 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_11 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_12 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_13 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_14 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_15 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_16 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_17 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_18 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_19 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_20 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_21 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_22 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_23 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_24 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_25 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_26 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_27 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_28 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_29 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_30 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_31 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_32 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_33 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_34 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_35 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_36 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_37 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_38 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_39 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_40 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_41 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_42 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_43 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_44 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_45 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_46 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_47 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_48 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_49 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_50 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_51 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_52 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_53 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_54 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_55 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_56 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_57 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_58 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_59 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_60 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_61 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_62 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_63 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_65 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_66 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_68 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_69 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_70 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_71 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_73 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_74 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_75 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_77 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_78 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_79 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_80 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_82 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_83 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_84 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_85 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_86 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_87 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_88 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_89 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_90 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_91 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_92 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_93 | 1.0 | 0.0 | 1.0 |
| ICLENCNL_94 | 0.0 | 1.0 | 0.0 |
| ICLENCNL_95 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)