Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PEPJJACL_2 | 102914 | 101334 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PEPJJACL_43 | 962 | 1634 | repUS2 | 676 / 681 | 92.31 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PEPJJACL_1 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_2 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_3 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_4 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_5 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_6 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_7 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_8 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_9 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_10 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_11 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_12 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_13 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_14 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_15 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_16 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_17 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_18 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_19 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_20 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_21 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_22 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_23 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_24 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_25 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_26 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_27 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_28 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_29 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_30 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_31 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_32 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_33 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_34 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_35 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_36 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_37 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_38 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_39 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_40 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_42 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_43 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_44 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_45 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_46 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_47 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_48 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_49 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_50 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_51 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_52 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_53 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_54 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_55 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_56 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_57 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_58 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_59 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_60 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_61 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_62 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_63 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_64 | 1.0 | 0.0 | 1.0 |
| PEPJJACL_65 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_66 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_67 | 0.0 | 1.0 | 0.0 |
| PEPJJACL_68 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PEPJJACL_29 | 4657 | 13526 | False | Siphoviridae | VOG4618, |
| PEPJJACL_33 | 39374 | 55210 | False | Myoviridae | VOG2211, |
Phigaro v2.4.0 (Database: Jan. 2024 release)