Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GFOGEDAG_44 | 66487 | 67287 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| GFOGEDAG_44 | 64381 | 65244 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| GFOGEDAG_190 | 14923 | 16848 | tet(Q) | ARO:3000191 | tet(Q) | 97.19 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GFOGEDAG_44 | 66487 | 67287 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| GFOGEDAG_190 | 14923 | 16848 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 96.94 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GFOGEDAG_44 | 64381 | 65241 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| GFOGEDAG_44 | 66490 | 67287 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| GFOGEDAG_190 | 14923 | 16845 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.50 | 100.00 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| GFOGEDAG_121 | 1410 | 2089 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GFOGEDAG_1 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_2 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_3 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_4 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_5 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_6 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_7 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_8 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_9 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_10 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_11 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_12 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_13 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_14 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_15 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_16 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_17 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_18 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_19 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_20 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_21 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_22 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_23 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_24 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_25 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_26 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_27 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_28 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_29 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_30 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_31 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_32 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_33 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_34 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_35 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_36 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_37 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_38 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_39 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_40 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_41 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_42 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_43 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_44 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_45 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_46 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_47 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_48 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_49 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_50 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_51 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_52 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_53 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_54 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_55 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_56 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_57 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_58 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_59 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_60 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_61 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_62 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_63 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_64 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_65 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_66 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_67 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_68 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_69 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_70 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_71 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_72 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_73 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_74 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_75 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_76 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_77 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_78 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_79 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_80 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_81 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_82 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_83 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_84 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_85 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_86 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_87 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_88 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_89 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_90 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_91 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_92 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_93 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_94 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_95 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_96 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_97 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_98 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_99 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_100 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_101 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_103 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_104 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_105 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_106 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_107 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_108 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_109 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_110 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_111 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_112 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_113 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_114 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_115 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_116 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_117 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_118 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_119 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_120 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_121 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_122 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_123 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_124 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_125 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_126 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_127 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_128 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_129 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_130 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_131 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_132 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_133 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_134 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_135 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_136 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_137 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_138 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_139 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_140 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_141 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_142 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_143 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_144 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_145 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_146 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_147 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_148 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_149 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_150 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_151 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_152 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_153 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_154 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_155 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_156 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_157 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_158 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_159 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_160 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_161 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_162 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_163 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_164 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_165 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_166 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_167 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_169 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_170 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_171 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_172 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_173 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_174 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_175 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_176 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_177 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_178 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_179 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_180 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_181 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_182 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_183 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_184 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_185 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_186 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_187 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_188 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_189 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_190 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_191 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_192 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_193 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_194 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_195 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_196 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_197 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_198 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_199 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_200 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_201 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_202 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_203 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_204 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_205 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_206 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_207 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_208 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_209 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_210 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_211 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_212 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_213 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_214 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_215 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_216 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_217 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_218 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_219 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_220 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_221 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_222 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_223 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_224 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_225 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_226 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_227 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_228 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_229 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_230 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_231 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_232 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_233 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_234 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_235 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_236 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_237 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_238 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_239 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_240 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_241 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_242 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_243 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_244 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_245 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_246 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_247 | 1.0 | 0.0 | 1.0 |
| GFOGEDAG_248 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_249 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_250 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_251 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_252 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_253 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_254 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_255 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_256 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_257 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_258 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_259 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_260 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_261 | 0.0 | 1.0 | 0.0 |
| GFOGEDAG_262 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GFOGEDAG_77 | 57777 | 69768 | False | Unknown | VOG4568, |
| GFOGEDAG_262 | 27341 | 35526 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)