Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MJKOALNJ_29 | 123052 | 124977 | tet(Q) | ARO:3000191 | tet(Q) | 96.10 | 97.56 | Z21523.1 |
| MJKOALNJ_58 | 29618 | 30352 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| MJKOALNJ_108 | 3277 | 4140 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MJKOALNJ_58 | 29618 | 30352 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| MJKOALNJ_58 | 27383 | 28846 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| MJKOALNJ_29 | 123052 | 124977 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 96.83 | 100.00 | X58717 |
| MJKOALNJ_58 | 26043 | 27257 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
| MJKOALNJ_38 | 29974 | 30924 | cfxA3 | Ampicillin | 86.12 | 98.34 | AF472622 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MJKOALNJ_108 | 3277 | 4137 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| MJKOALNJ_58 | 29618 | 30349 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| MJKOALNJ_29 | 123052 | 124974 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_063856409.1 |
| MJKOALNJ_58 | 27383 | 28843 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| MJKOALNJ_58 | 26043 | 27266 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
| MJKOALNJ_38 | 29972 | 30925 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | BLASTX | 83.65 | 99.07 | WP_004348227.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MJKOALNJ_1 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_2 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_3 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_4 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_5 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_6 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_7 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_8 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_9 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_10 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_11 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_12 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_13 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_14 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_15 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_16 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_17 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_18 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_19 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_20 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_21 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_22 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_23 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_24 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_25 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_26 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_27 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_28 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_29 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_30 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_31 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_32 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_33 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_34 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_35 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_36 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_37 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_38 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_39 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_40 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_41 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_42 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_43 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_44 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_45 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_46 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_47 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_48 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_49 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_50 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_51 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_52 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_53 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_54 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_55 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_56 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_57 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_58 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_59 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_60 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_61 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_62 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_63 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_64 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_65 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_66 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_67 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_68 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_69 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_70 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_71 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_72 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_73 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_74 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_75 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_76 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_77 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_78 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_79 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_80 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_81 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_82 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_83 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_84 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_85 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_86 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_87 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_88 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_89 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_90 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_91 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_92 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_93 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_94 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_95 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_96 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_97 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_98 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_99 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_100 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_101 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_102 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_103 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_104 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_106 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_107 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_108 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_109 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_110 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_111 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_112 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_113 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_114 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_115 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_116 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_117 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_118 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_119 | 0.0 | 1.0 | 0.0 |
| MJKOALNJ_120 | 1.0 | 0.0 | 1.0 |
| MJKOALNJ_121 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MJKOALNJ_34 | 47567 | 51454 | False | Unknown | VOG0189, |
| MJKOALNJ_38 | 45793 | 56667 | False | Siphoviridae | VOG3992, |
| MJKOALNJ_51 | 45995 | 54180 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)