Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEEGJLIB_66 | 126739 | 127704 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JEEGJLIB_66 | 126739 | 127704 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| JEEGJLIB_66 | 126739 | 127704 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| JEEGJLIB_66 | 126739 | 127704 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| JEEGJLIB_66 | 126739 | 127704 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEEGJLIB_66 | 126739 | 127701 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEEGJLIB_1 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_2 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_3 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_4 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_5 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_6 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_7 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_8 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_9 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_10 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_11 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_12 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_13 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_14 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_15 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_16 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_17 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_18 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_19 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_20 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_21 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_22 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_23 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_24 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_25 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_26 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_27 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_28 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_29 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_30 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_31 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_32 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_33 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_34 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_35 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_36 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_37 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_38 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_39 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_40 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_41 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_42 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_43 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_44 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_45 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_46 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_47 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_48 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_49 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_50 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_51 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_52 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_53 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_54 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_55 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_56 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_57 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_58 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_59 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_60 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_61 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_62 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_63 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_64 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_65 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_66 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_67 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_68 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_69 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_70 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_71 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_72 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_73 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_74 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_75 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_76 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_77 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_78 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_79 | 1.0 | 0.0 | 1.0 |
| JEEGJLIB_81 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_82 | 0.0 | 1.0 | 0.0 |
| JEEGJLIB_83 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEEGJLIB_4 | 76419 | 90923 | False | Myoviridae | VOG4575, |
| JEEGJLIB_66 | 1458 | 27344 | False | Myoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)