Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CONNBLJC_33 | 24988 | 26913 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| CONNBLJC_31 | 9844 | 11049 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CONNBLJC_33 | 24988 | 26913 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CONNBLJC_31 | 9310 | 9819 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| CONNBLJC_33 | 24991 | 26913 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| CONNBLJC_31 | 9847 | 11049 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CONNBLJC_5 | 7255 | 5675 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| CONNBLJC_62 | 837 | 1516 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CONNBLJC_1 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_2 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_3 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_4 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_5 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_6 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_7 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_8 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_9 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_10 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_11 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_12 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_13 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_14 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_15 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_16 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_17 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_18 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_19 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_20 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_21 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_22 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_23 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_24 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_25 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_26 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_27 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_28 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_29 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_30 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_31 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_32 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_33 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_34 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_35 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_36 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_37 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_38 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_39 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_40 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_41 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_42 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_43 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_44 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_45 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_46 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_47 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_48 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_49 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_50 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_51 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_52 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_53 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_54 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_55 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_57 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_58 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_59 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_60 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_61 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_62 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_63 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_64 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_65 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_66 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_67 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_68 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_69 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_70 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_71 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_72 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_73 | 1.0 | 0.0 | 1.0 |
| CONNBLJC_74 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_75 | 0.0 | 1.0 | 0.0 |
| CONNBLJC_76 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)