Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CGGEGMBM_13 | 9837 | 10727 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CGGEGMBM_13 | 9840 | 10727 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CGGEGMBM_1 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_2 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_3 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_4 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_5 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_6 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_7 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_8 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_9 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_10 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_11 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_12 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_13 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_14 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_15 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_16 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_17 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_18 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_19 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_20 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_21 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_22 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_23 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_24 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_25 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_26 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_27 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_28 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_29 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_30 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_31 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_32 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_33 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_34 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_35 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_36 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_37 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_38 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_39 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_40 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_41 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_42 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_43 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_44 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_45 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_46 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_47 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_48 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_49 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_50 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_52 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_53 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_54 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_55 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_56 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_57 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_58 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_59 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_60 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_61 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_62 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_63 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_65 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_66 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_67 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_68 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_69 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_70 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_71 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_72 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_73 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_74 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_75 | 1.0 | 0.0 | 1.0 |
| CGGEGMBM_76 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_77 | 0.0 | 1.0 | 0.0 |
| CGGEGMBM_78 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CGGEGMBM_4 | 113605 | 127789 | False | Siphoviridae | VOG2703, |
Phigaro v2.4.0 (Database: Jan. 2024 release)