Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EHDGIJBL_97 | 112367 | 113257 | CblA-1 | ARO:3002999 | CblA-1 | 99.32 | 100.00 | GQ343019.1 |
| EHDGIJBL_52 | 20038 | 21963 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| EHDGIJBL_56 | 1171 | 3096 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| EHDGIJBL_28 | 120 | 1085 | CfxA3 | ARO:3003003 | CfxA3 | 99.69 | 100.00 | AF472622.2 |
| EHDGIJBL_56 | 84 | 884 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EHDGIJBL_28 | 120 | 1085 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| EHDGIJBL_52 | 20038 | 21963 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| EHDGIJBL_56 | 84 | 884 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EHDGIJBL_28 | 120 | 1082 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.69 | 100.00 | WP_004339683.1 |
| EHDGIJBL_52 | 20041 | 21963 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| EHDGIJBL_97 | 112370 | 113257 | cblA | CblA family class A beta-lactamase | BLASTX | 99.32 | 100.00 | WP_005827792.1 |
| EHDGIJBL_56 | 84 | 881 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| EHDGIJBL_56 | 1171 | 3093 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EHDGIJBL_103 | 1809 | 2488 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EHDGIJBL_1 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_2 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_3 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_4 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_5 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_6 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_7 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_8 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_9 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_10 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_11 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_12 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_13 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_14 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_15 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_16 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_17 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_18 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_19 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_20 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_21 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_22 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_23 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_24 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_25 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_26 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_27 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_28 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_29 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_30 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_31 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_32 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_33 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_34 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_35 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_36 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_37 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_38 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_39 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_40 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_41 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_42 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_43 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_44 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_45 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_46 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_47 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_48 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_49 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_50 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_51 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_52 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_53 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_54 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_55 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_56 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_57 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_58 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_59 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_60 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_61 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_62 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_63 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_64 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_65 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_66 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_67 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_68 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_69 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_70 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_71 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_72 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_73 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_74 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_75 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_76 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_77 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_78 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_79 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_80 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_81 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_82 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_83 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_84 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_85 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_86 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_87 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_88 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_89 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_90 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_92 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_93 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_94 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_95 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_96 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_97 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_98 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_99 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_100 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_101 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_102 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_103 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_104 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_105 | 1.0 | 0.0 | 1.0 |
| EHDGIJBL_106 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_107 | 0.0 | 1.0 | 0.0 |
| EHDGIJBL_108 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EHDGIJBL_42 | 82140 | 88467 | False | Myoviridae | VOG0982, |
| EHDGIJBL_53 | 115200 | 126142 | False | Siphoviridae | VOG0749, |
Phigaro v2.4.0 (Database: Jan. 2024 release)