Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AHBOONIG_89 | 131021 | 131923 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| AHBOONIG_12 | 100784 | 102730 | tet(Q) | ARO:3000191 | tet(Q) | 96.39 | 98.63 | Z21523.1 |
| AHBOONIG_51 | 8233 | 9198 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AHBOONIG_51 | 8233 | 9198 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| AHBOONIG_51 | 8233 | 9198 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| AHBOONIG_51 | 8233 | 9198 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| AHBOONIG_51 | 8233 | 9198 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| AHBOONIG_12 | 100784 | 102696 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 99.33 | L33696 |
| AHBOONIG_89 | 131021 | 131923 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AHBOONIG_89 | 131021 | 131920 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| AHBOONIG_51 | 8236 | 9198 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| AHBOONIG_12 | 100784 | 102697 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.37 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AHBOONIG_65 | 2004 | 2683 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AHBOONIG_1 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_2 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_3 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_4 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_5 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_6 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_7 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_8 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_9 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_10 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_11 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_12 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_13 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_14 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_15 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_16 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_17 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_18 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_19 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_20 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_21 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_22 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_23 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_24 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_25 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_26 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_27 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_28 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_29 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_30 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_31 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_32 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_33 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_34 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_35 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_36 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_37 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_38 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_39 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_40 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_41 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_42 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_43 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_44 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_45 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_46 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_47 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_48 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_49 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_50 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_51 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_52 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_53 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_54 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_55 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_56 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_57 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_58 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_59 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_60 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_61 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_62 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_63 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_64 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_65 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_66 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_68 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_69 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_70 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_71 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_72 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_74 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_75 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_76 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_77 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_78 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_79 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_80 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_81 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_82 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_83 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_84 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_85 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_86 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_87 | 1.0 | 0.0 | 1.0 |
| AHBOONIG_88 | 0.0 | 1.0 | 0.0 |
| AHBOONIG_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AHBOONIG_43 | 1908 | 9702 | False | Siphoviridae | VOG4581, |
| AHBOONIG_46 | 4855 | 9418 | False | Siphoviridae | VOG4568, |
Phigaro v2.4.0 (Database: Jan. 2024 release)