Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IHPOLOGB_36 | 358735 | 360660 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| IHPOLOGB_53 | 21477 | 22367 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IHPOLOGB_36 | 358735 | 360660 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IHPOLOGB_53 | 21480 | 22367 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| IHPOLOGB_36 | 358738 | 360660 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IHPOLOGB_6 | 646 | 1226 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IHPOLOGB_1 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_2 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_3 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_4 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_5 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_6 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_7 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_8 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_9 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_11 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_12 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_13 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_14 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_15 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_16 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_17 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_19 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_20 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_21 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_22 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_23 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_24 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_25 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_26 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_27 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_28 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_29 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_30 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_31 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_32 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_33 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_34 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_35 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_36 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_37 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_38 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_39 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_40 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_41 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_42 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_43 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_44 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_45 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_46 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_47 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_48 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_49 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_50 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_51 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_52 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_53 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_54 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_55 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_56 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_57 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_58 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_59 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_60 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_61 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_62 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_63 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_64 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_65 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_66 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_67 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_68 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_69 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_70 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_71 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_72 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_73 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_74 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_75 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_76 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_77 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_78 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_79 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_80 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_81 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_82 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_83 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_84 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_85 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_86 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_87 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_88 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_89 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_90 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_91 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_92 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_93 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_94 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_95 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_96 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_97 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_98 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_99 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_100 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_101 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_102 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_103 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_104 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_105 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_106 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_107 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_108 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_109 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_110 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_111 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_113 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_114 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_115 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_116 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_117 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_118 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_119 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_120 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_121 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_122 | 1.0 | 0.0 | 1.0 |
| IHPOLOGB_123 | 0.0 | 1.0 | 0.0 |
| IHPOLOGB_124 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IHPOLOGB_33 | 47986 | 59752 | False | Siphoviridae | VOG0749, |
| IHPOLOGB_47 | 159224 | 164506 | False | Myoviridae | VOG1931, |
| IHPOLOGB_47 | 229118 | 243857 | False | Myoviridae | / |
| IHPOLOGB_48 | 14609 | 28578 | False | Unknown | VOG0083, |
Phigaro v2.4.0 (Database: Jan. 2024 release)