Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 0 | 0 | 9.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| POIDBMFB_116 | 7307 | 9253 | tet(Q) | ARO:3000191 | tet(Q) | 96.24 | 98.63 | Z21523.1 |
| POIDBMFB_124 | 3685 | 5658 | tet(Q) | ARO:3000191 | tet(Q) | 97.11 | 100.00 | Z21523.1 |
| POIDBMFB_133 | 2436 | 2978 | SAT-4 | ARO:3002897 | SAT-4 | 99.44 | 100.00 | U01945.1 |
| POIDBMFB_133 | 1549 | 2343 | APH(3')-IIIa | ARO:3002647 | APH(3')-IIIa | 100.00 | 100.00 | CP004067.1 |
| POIDBMFB_29 | 291 | 1430 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| POIDBMFB_43 | 140 | 1306 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| POIDBMFB_92 | 114 | 977 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| POIDBMFB_71 | 1295 | 2161 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| POIDBMFB_133 | 1549 | 2343 | aph(3')-III | Kanamycin, Amikacin, Neomycin, Butirosin, Isepamicin, Lividomycin, Paromomycin, Ribostamycin | 100.00 | 100.00 | M26832 |
| POIDBMFB_124 | 3685 | 5610 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| POIDBMFB_43 | 140 | 1306 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| POIDBMFB_71 | 1295 | 2158 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| POIDBMFB_92 | 114 | 974 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| POIDBMFB_133 | 1552 | 2343 | aph(3')-IIIa | aminoglycoside O-phosphotransferase APH(3')-IIIa | EXACTX | 100.00 | 100.00 | WP_001096887.1 |
| POIDBMFB_107 | 100325 | 101230 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| POIDBMFB_133 | 2439 | 2978 | sat4 | streptothricin N-acetyltransferase Sat4 | EXACTX | 100.00 | 100.00 | WP_000627290.1 |
| POIDBMFB_124 | 3688 | 5610 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| POIDBMFB_29 | 291 | 1427 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| POIDBMFB_43 | 143 | 1306 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| POIDBMFB_116 | 7340 | 9253 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.37 | 99.53 | WP_063856409.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| POIDBMFB_139 | 4677 | 5356 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| POIDBMFB_1 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_2 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_3 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_4 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_5 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_6 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_7 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_8 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_9 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_10 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_11 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_12 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_13 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_14 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_15 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_16 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_17 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_18 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_19 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_20 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_21 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_22 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_23 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_24 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_25 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_26 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_27 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_28 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_29 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_30 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_31 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_32 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_33 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_34 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_35 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_36 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_37 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_38 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_39 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_40 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_41 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_42 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_43 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_44 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_45 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_46 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_47 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_48 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_49 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_50 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_51 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_52 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_53 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_54 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_55 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_56 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_57 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_58 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_59 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_60 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_61 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_62 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_63 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_64 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_65 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_66 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_67 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_68 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_69 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_70 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_71 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_72 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_73 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_74 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_75 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_76 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_77 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_78 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_79 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_80 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_81 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_82 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_83 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_84 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_85 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_86 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_87 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_88 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_89 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_90 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_91 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_92 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_93 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_94 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_95 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_96 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_97 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_98 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_99 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_100 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_101 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_102 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_103 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_104 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_105 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_106 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_107 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_108 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_109 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_110 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_111 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_112 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_113 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_114 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_115 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_116 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_117 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_118 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_119 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_120 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_121 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_122 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_123 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_124 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_125 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_126 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_127 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_128 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_129 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_130 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_131 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_132 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_133 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_134 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_135 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_136 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_137 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_138 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_139 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_140 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_142 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_143 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_144 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_145 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_146 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_147 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_148 | 1.0 | 0.0 | 1.0 |
| POIDBMFB_149 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_150 | 0.0 | 1.0 | 0.0 |
| POIDBMFB_151 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| POIDBMFB_93 | 8001 | 20443 | False | Siphoviridae | VOG10767, |
Phigaro v2.4.0 (Database: Jan. 2024 release)