Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EFMGHHJC_1 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_2 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_3 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_5 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_6 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_8 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_9 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_10 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_11 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_12 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_13 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_15 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_16 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_17 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_18 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_19 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_20 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_22 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_23 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_24 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_25 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_26 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_27 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_29 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_30 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_31 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_32 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_33 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_34 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_35 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_36 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_37 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_39 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_40 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_41 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_42 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_43 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_44 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_45 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_46 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_47 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_48 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_49 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_50 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_51 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_52 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_53 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_54 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_55 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_56 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_57 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_58 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_59 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_60 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_61 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_62 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_64 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_65 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_66 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_67 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_68 | 1.0 | 0.0 | 1.0 |
| EFMGHHJC_69 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_70 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_71 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_72 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_73 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_74 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_75 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_76 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_77 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_78 | 0.0 | 1.0 | 0.0 |
| EFMGHHJC_79 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EFMGHHJC_42 | 50851 | 66590 | False | Siphoviridae | VOG2090, VOG2352, VOG4010, VOG0275, VOG0371, VOG4602, VOG8520, VOG8520, VOG4552, VOG2228, VOG9708, VOG4611, VOG0322, VOG4548, VOG6545 |
| EFMGHHJC_42 | 68347 | 94471 | False | Siphoviridae | VOG5278, VOG3307, VOG0327, VOG6005, VOG0198, VOG4841, VOG4581, VOG2545, VOG0376, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG0660, VOG8263, VOG4633, VOG4659, VOG8355, VOG1594 |
| EFMGHHJC_53 | 9107 | 36567 | False | Myoviridae | VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG10904, VOG7237, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545 |
Phigaro v2.4.0 (Database: Jan. 2024 release)