Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CHLLKEPK_1 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_2 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_3 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_4 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_5 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_7 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_8 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_9 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_10 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_11 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_12 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_13 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_14 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_15 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_16 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_18 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_19 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_20 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_21 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_22 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_23 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_24 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_25 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_26 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_27 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_28 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_29 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_30 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_31 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_32 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_33 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_34 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_35 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_36 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_38 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_39 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_40 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_41 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_42 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_43 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_44 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_45 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_46 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_47 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_48 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_49 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_50 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_51 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_52 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_54 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_55 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_56 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_57 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_58 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_59 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_60 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_61 | 1.0 | 0.0 | 1.0 |
| CHLLKEPK_63 | 0.0 | 1.0 | 0.0 |
| CHLLKEPK_64 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CHLLKEPK_39 | 32132 | 60703 | False | Myoviridae | VOG0861, VOG4705, VOG9945, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4545, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
| CHLLKEPK_42 | 195416 | 199075 | False | Myoviridae / Siphoviridae | VOG9667, VOG2228, VOG4799, VOG8288, VOG5458, VOG8288, VOG4566 |
Phigaro v2.4.0 (Database: Jan. 2024 release)