Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
BDIOIBNJ_927039871102WalR9.09e-113transcriptional regulatory protein83.40100.00EPH95667
BDIOIBNJ_61257812775CspR1.41e-33cold shock protein89.39100.00AAO82613

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
BDIOIBNJ_10.01.00.0
BDIOIBNJ_20.01.00.0
BDIOIBNJ_60.01.00.0
BDIOIBNJ_70.01.00.0
BDIOIBNJ_80.01.00.0
BDIOIBNJ_90.01.00.0
BDIOIBNJ_100.01.00.0
BDIOIBNJ_110.01.00.0
BDIOIBNJ_120.01.00.0
BDIOIBNJ_130.01.00.0
BDIOIBNJ_140.01.00.0
BDIOIBNJ_150.01.00.0
BDIOIBNJ_160.01.00.0
BDIOIBNJ_170.01.00.0
BDIOIBNJ_180.01.00.0
BDIOIBNJ_190.01.00.0
BDIOIBNJ_200.01.00.0
BDIOIBNJ_210.01.00.0
BDIOIBNJ_221.00.01.0
BDIOIBNJ_230.01.00.0
BDIOIBNJ_240.01.00.0
BDIOIBNJ_250.01.00.0
BDIOIBNJ_260.01.00.0
BDIOIBNJ_270.01.00.0
BDIOIBNJ_281.00.01.0
BDIOIBNJ_291.00.01.0
BDIOIBNJ_300.01.00.0
BDIOIBNJ_311.00.01.0
BDIOIBNJ_321.00.01.0
BDIOIBNJ_331.00.01.0
BDIOIBNJ_341.00.01.0
BDIOIBNJ_351.00.01.0
BDIOIBNJ_361.00.01.0
BDIOIBNJ_370.01.00.0
BDIOIBNJ_381.00.01.0
BDIOIBNJ_390.01.00.0
BDIOIBNJ_401.00.01.0
BDIOIBNJ_410.01.00.0
BDIOIBNJ_421.00.01.0
BDIOIBNJ_431.00.01.0
BDIOIBNJ_451.00.01.0
BDIOIBNJ_460.01.00.0
BDIOIBNJ_471.00.01.0
BDIOIBNJ_480.01.00.0
BDIOIBNJ_491.00.01.0
BDIOIBNJ_501.00.01.0
BDIOIBNJ_511.00.01.0
BDIOIBNJ_521.00.01.0
BDIOIBNJ_551.00.01.0
BDIOIBNJ_561.00.01.0
BDIOIBNJ_571.00.01.0
BDIOIBNJ_581.00.01.0
BDIOIBNJ_590.01.00.0
BDIOIBNJ_601.00.01.0
BDIOIBNJ_611.00.01.0
BDIOIBNJ_621.00.01.0
BDIOIBNJ_631.00.01.0
BDIOIBNJ_641.00.01.0
BDIOIBNJ_651.00.01.0
BDIOIBNJ_661.00.01.0
BDIOIBNJ_671.00.01.0
BDIOIBNJ_700.01.00.0
BDIOIBNJ_810.01.00.0
BDIOIBNJ_920.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
BDIOIBNJ_16144032442FalseSiphoviridaeVOG1637, VOG0648, VOG3498, VOG4763, VOG4633, VOG4545, VOG1898, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG0519, VOG4841, VOG10118, VOG4673, VOG0744, VOG4693, VOG5562, VOG5998, VOG4900, VOG0189, VOG4566, VOG11003, VOG1309, VOG4600, VOG10867, VOG4552, VOG5353, VOG6495, VOG4602, VOG9897
BDIOIBNJ_19810028750FalseSiphoviridaeVOG4918, VOG0703, VOG9998, VOG1637, VOG7896, VOG4599, VOG4605, VOG6163, VOG5852, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556
BDIOIBNJ_59168101174922FalseSiphoviridaeVOG0226, VOG0189, VOG11003, VOG9860, VOG6623, VOG4693, VOG0195, VOG0275, VOG4643

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements