Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GANCFDEA_1 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_2 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_3 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_4 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_5 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_6 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_7 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_8 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_9 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_10 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_11 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_12 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_13 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_14 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_15 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_16 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_17 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_18 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_19 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_20 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_21 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_22 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_23 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_24 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_25 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_26 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_27 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_28 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_29 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_30 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_31 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_32 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_33 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_34 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_35 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_36 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_37 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_38 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_39 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_40 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_41 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_42 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_43 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_44 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_45 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_46 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_47 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_48 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_49 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_50 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_51 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_52 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_53 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_54 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_56 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_57 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_58 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_59 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_60 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_61 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_62 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_63 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_64 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_65 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_66 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_67 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_68 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_69 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_70 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_71 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_73 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_74 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_75 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_76 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_77 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_78 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_79 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_80 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_81 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_82 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_83 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_84 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_85 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_86 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_87 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_88 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_89 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_90 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_91 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_92 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_93 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_94 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_95 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_96 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_97 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_98 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_99 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_100 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_101 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_102 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_103 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_104 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_105 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_106 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_107 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_108 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_109 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_110 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_111 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_112 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_113 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_114 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_115 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_116 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_117 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_118 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_119 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_120 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_121 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_122 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_123 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_124 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_125 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_126 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_127 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_128 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_129 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_130 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_131 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_132 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_133 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_134 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_135 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_136 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_137 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_138 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_139 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_140 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_141 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_142 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_143 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_144 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_145 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_146 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_147 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_148 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_149 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_150 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_151 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_152 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_153 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_154 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_155 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_156 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_157 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_158 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_159 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_160 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_161 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_162 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_163 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_164 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_165 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_166 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_167 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_168 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_169 | 1.0 | 0.0 | 1.0 |
| GANCFDEA_170 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_171 | 0.0 | 1.0 | 0.0 |
| GANCFDEA_172 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GANCFDEA_15 | 7868 | 44695 | False | Siphoviridae | VOG0861, VOG4705, VOG0566, VOG1594, VOG8355, VOG4659, VOG4633, VOG4545, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG10115, VOG4581, VOG4841, VOG0198, VOG3349, VOG0327, VOG3307, VOG5278, VOG3307, VOG3307, VOG3307, VOG4606, VOG6545, VOG4548, VOG0322, VOG10904, VOG4611, VOG9708, VOG5342, VOG4995, VOG4552, VOG8520 |
| GANCFDEA_15 | 54696 | 85251 | False | Myoviridae | VOG0703, VOG7017, VOG0861, VOG4705, VOG9945, VOG4397, VOG5913, VOG0173, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG8263, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG4564, VOG1912, VOG7407 |
| GANCFDEA_128 | 11387 | 15046 | False | Myoviridae / Siphoviridae | VOG9667, VOG4566, VOG8288, VOG5458, VOG8288, VOG4799, VOG2228 |
| GANCFDEA_166 | 4710 | 35484 | False | Myoviridae | VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)