Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GGJMDCOG_1 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_2 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_3 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_4 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_5 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_6 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_7 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_8 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_9 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_10 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_11 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_12 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_13 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_14 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_15 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_16 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_17 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_18 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_19 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_20 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_21 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_22 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_23 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_24 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_25 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_26 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_27 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_28 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_29 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_30 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_32 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_33 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_34 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_35 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_36 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_37 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_38 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_40 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_41 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_42 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_43 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_44 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_45 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_46 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_47 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_48 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_49 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_50 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_51 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_52 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_53 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_54 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_55 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_56 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_58 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_59 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_60 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_61 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_62 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_63 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_64 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_65 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_66 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_67 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_68 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_69 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_70 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_71 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_72 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_73 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_74 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_75 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_76 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_77 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_78 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_79 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_80 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_81 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_82 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_83 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_84 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_85 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_86 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_87 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_88 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_89 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_90 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_91 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_92 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_93 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_94 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_95 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_96 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_97 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_98 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_99 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_100 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_101 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_102 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_103 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_104 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_105 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_106 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_107 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_108 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_109 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_110 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_111 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_112 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_113 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_114 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_115 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_116 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_117 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_118 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_119 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_120 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_121 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_122 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_123 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_124 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_125 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_126 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_127 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_128 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_129 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_130 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_131 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_132 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_133 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_134 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_135 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_136 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_137 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_138 | 1.0 | 0.0 | 1.0 |
| GGJMDCOG_139 | 0.0 | 1.0 | 0.0 |
| GGJMDCOG_140 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GGJMDCOG_88 | 13746 | 41484 | False | Siphoviridae | VOG1446, VOG1698, VOG6005, VOG0198, VOG4841, VOG1648, VOG4581, VOG1886, VOG5051, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG3179, VOG4633, VOG4659, VOG7017, VOG0083, VOG4687, VOG6540, VOG4904 |
| GGJMDCOG_103 | 10300 | 36523 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
Phigaro v2.4.0 (Database: Jan. 2024 release)