Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MBBNPOJB_44 | 87730 | 89655 | tet(Q) | ARO:3000191 | tet(Q) | 97.04 | 97.56 | Z21523.1 |
| MBBNPOJB_77 | 3326 | 5251 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MBBNPOJB_44 | 87730 | 89655 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| MBBNPOJB_77 | 631 | 1848 | mef(A) | Erythromycin, Azithromycin | 95.07 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MBBNPOJB_44 | 87733 | 89655 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| MBBNPOJB_77 | 3326 | 5248 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| MBBNPOJB_77 | 631 | 1851 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MBBNPOJB_78 | 23 | 259 | metJ | 2.97e-56 | regulatory protein | 100.00 | 75.24 | AAA24163 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MBBNPOJB_11 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_22 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_33 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_44 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_55 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_66 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_77 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_88 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_99 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_110 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_111 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_122 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_133 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_144 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_155 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_166 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_177 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_188 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_199 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_210 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_221 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_222 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_233 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_244 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_255 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_266 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_277 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_288 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_299 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_309 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_310 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_311 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_312 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_313 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_314 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_315 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_316 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_317 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_318 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_319 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_320 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_321 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_322 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_323 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_324 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_325 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_326 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_327 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_328 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_329 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_331 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_332 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_333 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_335 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_336 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_337 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_338 | 1.0 | 0.0 | 1.0 |
| MBBNPOJB_339 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_344 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_355 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_366 | 0.0 | 1.0 | 0.0 |
| MBBNPOJB_377 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)