Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OILIHAJN_273 | 285 | 1199 | EstT | ARO:3007459 | EstT | 99.02 | 99.35 | CP094932.1 |
| OILIHAJN_221 | 85563 | 86915 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 68.65 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OILIHAJN_221 | 85563 | 86915 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 70.25 | Z21523 |
| OILIHAJN_268 | 194 | 1411 | mef(A) | Erythromycin, Azithromycin | 95.07 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OILIHAJN_221 | 85563 | 86915 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 100.00 | 70.36 | WP_002560998.1 |
| OILIHAJN_273 | 288 | 1127 | estT | macrolide hydrolase EstT | BLASTX | 98.94 | 100.00 | WP_185148407.1 |
| OILIHAJN_268 | 194 | 1414 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.77 | 99.75 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OILIHAJN_11 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_22 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_33 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_44 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_55 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_66 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_77 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_88 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_99 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_110 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_111 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_122 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_133 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_144 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_155 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_166 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_177 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_188 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_199 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_210 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_221 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_222 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_233 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_244 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_247 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_248 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_249 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_250 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_251 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_252 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_253 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_254 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_255 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_256 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_257 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_258 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_259 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_260 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_261 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_262 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_263 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_264 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_265 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_266 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_267 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_268 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_269 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_270 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_271 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_273 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_274 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_275 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_276 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_277 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_278 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_279 | 1.0 | 0.0 | 1.0 |
| OILIHAJN_280 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_287 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_298 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_309 | 0.0 | 1.0 | 0.0 |
| OILIHAJN_320 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OILIHAJN_111 | 212858 | 226073 | False | Siphoviridae | VOG1792, |
| OILIHAJN_111 | 676725 | 684600 | False | Unknown | VOG4855, |
Phigaro v2.4.0 (Database: Jan. 2024 release)