Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IJMCNBEB_55 | 31908 | 32612 | WalR | 4.39e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| IJMCNBEB_11 | 21967 | 22164 | CspR | 1.09e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IJMCNBEB_600 | 1791 | 2849 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
| IJMCNBEB_680 | 3169 | 3897 | repUS74 | 729 / 1062 | 98.63 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IJMCNBEB_1 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_2 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_3 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_4 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_6 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_7 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_8 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_10 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_11 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_12 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_13 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_14 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_15 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_16 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_17 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_18 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_19 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_20 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_21 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_22 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_23 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_24 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_25 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_26 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_27 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_28 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_29 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_30 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_31 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_32 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_33 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_34 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_35 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_36 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_37 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_38 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_39 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_41 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_42 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_43 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_44 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_45 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_46 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_47 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_48 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_49 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_50 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_51 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_52 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_53 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_54 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_55 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_56 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_57 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_58 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_59 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_66 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_77 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_87 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_96 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_107 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_108 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_119 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_130 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_141 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_150 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_161 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_172 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_183 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_194 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_204 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_215 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_216 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_227 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_238 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_248 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_259 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_270 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_281 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_292 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_303 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_314 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_324 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_325 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_336 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_347 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_357 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_368 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_379 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_389 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_400 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_410 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_421 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_432 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_433 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_443 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_454 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_464 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_475 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_486 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_497 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_505 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_514 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_523 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_533 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_534 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_545 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_556 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_567 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_578 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_589 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_600 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_611 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_622 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_633 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_644 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_645 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_656 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_662 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_663 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_664 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_665 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_666 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_667 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_668 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_669 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_670 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_671 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_672 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_673 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_674 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_675 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_676 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_677 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_678 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_679 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_680 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_681 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_682 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_683 | 0.0 | 1.0 | 0.0 |
| IJMCNBEB_684 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_686 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_687 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_688 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_689 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_691 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_692 | 1.0 | 0.0 | 1.0 |
| IJMCNBEB_693 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IJMCNBEB_194 | 3252 | 32801 | False | Siphoviridae | VOG4649, VOG0602, VOG7017, VOG0861, VOG7896, VOG6455, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG0637, VOG4564, VOG0720, VOG4544, VOG3699, VOG4570, VOG3477, VOG0198, VOG2338, VOG5821, VOG0044, VOG5733, VOG3643, VOG2820 |
| IJMCNBEB_216 | 98017 | 127318 | False | Siphoviridae | VOG0054, VOG1637, VOG0648, VOG3498, VOG4763, VOG4633, VOG4545, VOG1898, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG0519, VOG4841, VOG0765, VOG4673, VOG0744, VOG4693, VOG5562, VOG5998, VOG4900, VOG0189, VOG4566, VOG11003, VOG1309, VOG4600, VOG10867, VOG0181, VOG4552, VOG5353 |
Phigaro v2.4.0 (Database: Jan. 2024 release)