Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KOEBCDFE_24 | 57440 | 56736 | WalR | 5.38e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| KOEBCDFE_41 | 27405 | 27208 | CspR | 5.90e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
| KOEBCDFE_113 | 767 | 3 | BcactA (Bcin16g02020) | 1.44e-179 | conserved actin protein | 89.80 | 68.00 | ATZ58410 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KOEBCDFE_1 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_2 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_6 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_15 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_24 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_29 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_30 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_31 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_32 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_33 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_34 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_35 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_36 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_37 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_38 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_39 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_40 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_41 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_42 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_43 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_44 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_45 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_46 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_47 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_48 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_49 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_50 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_51 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_52 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_53 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_54 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_55 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_56 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_57 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_58 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_59 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_60 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_61 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_62 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_63 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_64 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_65 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_66 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_67 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_68 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_69 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_70 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_71 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_72 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_73 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_74 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_75 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_76 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_77 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_78 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_79 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_80 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_81 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_82 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_83 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_84 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_85 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_86 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_87 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_88 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_89 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_90 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_91 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_92 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_93 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_95 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_96 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_98 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_99 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_100 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_101 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_102 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_103 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_104 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_105 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_106 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_107 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_108 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_109 | 1.0 | 0.0 | 1.0 |
| KOEBCDFE_110 | 0.0 | 1.0 | 0.0 |
| KOEBCDFE_111 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KOEBCDFE_41 | 1235 | 5400 | False | Unknown | VOG0189, VOG4566, VOG0186, VOG1309 |
Phigaro v2.4.0 (Database: Jan. 2024 release)