Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DGECKPHD_164 | 30485 | 31192 | WalR | 1.72e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| DGECKPHD_142 | 49992 | 50189 | CspR | 7.87e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| DGECKPHD_142 | 49992 | 50186 | CspA | 3.84e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DGECKPHD_1 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_2 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_3 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_4 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_5 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_6 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_7 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_8 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_9 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_10 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_12 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_13 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_14 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_15 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_16 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_17 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_18 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_19 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_20 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_21 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_23 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_24 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_25 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_26 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_27 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_28 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_30 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_32 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_36 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_47 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_58 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_69 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_80 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_91 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_102 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_113 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_114 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_122 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_123 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_124 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_125 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_126 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_127 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_128 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_129 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_130 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_131 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_132 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_133 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_134 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_135 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_136 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_137 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_138 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_139 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_140 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_141 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_142 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_143 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_144 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_145 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_146 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_147 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_148 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_149 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_150 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_151 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_152 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_153 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_154 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_155 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_156 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_157 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_158 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_159 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_160 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_161 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_162 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_163 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_164 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_165 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_166 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_167 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_168 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_169 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_170 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_171 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_172 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_173 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_174 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_175 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_176 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_177 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_178 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_179 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_180 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_181 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_182 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_183 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_184 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_185 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_186 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_187 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_188 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_189 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_190 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_191 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_192 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_193 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_194 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_195 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_196 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_197 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_198 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_199 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_200 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_201 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_202 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_203 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_204 | 0.0 | 1.0 | 0.0 |
| DGECKPHD_206 | 1.0 | 0.0 | 1.0 |
| DGECKPHD_207 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DGECKPHD_132 | 5581 | 15639 | False | Myoviridae / Siphoviridae | VOG10859, VOG8987, VOG11003, VOG6128, VOG9454, VOG0535, VOG0322, VOG6545, VOG0514, VOG4799, VOG0025, VOG4693, VOG4571, VOG0371, VOG9422, VOG5545 |
| DGECKPHD_175 | 26158 | 40590 | False | Siphoviridae | VOG0565, VOG4856, VOG5962, VOG3462, VOG0801, VOG6163, VOG0817, VOG0725, VOG0799, VOG0704, VOG4713 |
Phigaro v2.4.0 (Database: Jan. 2024 release)