Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| POLPOABD_1 | 0.0 | 1.0 | 0.0 |
| POLPOABD_2 | 1.0 | 0.0 | 1.0 |
| POLPOABD_5 | 1.0 | 0.0 | 1.0 |
| POLPOABD_6 | 0.0 | 1.0 | 0.0 |
| POLPOABD_7 | 0.0 | 1.0 | 0.0 |
| POLPOABD_8 | 0.0 | 1.0 | 0.0 |
| POLPOABD_9 | 1.0 | 0.0 | 1.0 |
| POLPOABD_10 | 0.0 | 1.0 | 0.0 |
| POLPOABD_11 | 0.0 | 1.0 | 0.0 |
| POLPOABD_12 | 1.0 | 0.0 | 1.0 |
| POLPOABD_13 | 1.0 | 0.0 | 1.0 |
| POLPOABD_14 | 0.0 | 1.0 | 0.0 |
| POLPOABD_15 | 1.0 | 0.0 | 1.0 |
| POLPOABD_16 | 0.0 | 1.0 | 0.0 |
| POLPOABD_18 | 0.0 | 1.0 | 0.0 |
| POLPOABD_19 | 1.0 | 0.0 | 1.0 |
| POLPOABD_20 | 1.0 | 0.0 | 1.0 |
| POLPOABD_21 | 0.0 | 1.0 | 0.0 |
| POLPOABD_22 | 1.0 | 0.0 | 1.0 |
| POLPOABD_23 | 1.0 | 0.0 | 1.0 |
| POLPOABD_24 | 1.0 | 0.0 | 1.0 |
| POLPOABD_25 | 1.0 | 0.0 | 1.0 |
| POLPOABD_26 | 1.0 | 0.0 | 1.0 |
| POLPOABD_28 | 1.0 | 0.0 | 1.0 |
| POLPOABD_29 | 1.0 | 0.0 | 1.0 |
| POLPOABD_30 | 1.0 | 0.0 | 1.0 |
| POLPOABD_31 | 1.0 | 0.0 | 1.0 |
| POLPOABD_32 | 1.0 | 0.0 | 1.0 |
| POLPOABD_33 | 1.0 | 0.0 | 1.0 |
| POLPOABD_35 | 0.0 | 1.0 | 0.0 |
| POLPOABD_36 | 1.0 | 0.0 | 1.0 |
| POLPOABD_37 | 1.0 | 0.0 | 1.0 |
| POLPOABD_39 | 1.0 | 0.0 | 1.0 |
| POLPOABD_40 | 0.0 | 1.0 | 0.0 |
| POLPOABD_41 | 1.0 | 0.0 | 1.0 |
| POLPOABD_42 | 0.0 | 1.0 | 0.0 |
| POLPOABD_44 | 0.0 | 1.0 | 0.0 |
| POLPOABD_46 | 1.0 | 0.0 | 1.0 |
| POLPOABD_57 | 1.0 | 0.0 | 1.0 |
| POLPOABD_68 | 0.0 | 1.0 | 0.0 |
| POLPOABD_79 | 0.0 | 1.0 | 0.0 |
| POLPOABD_90 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| POLPOABD_1 | 60751 | 77397 | False | Myoviridae | VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025 |
| POLPOABD_24 | 3464 | 39066 | False | Siphoviridae | VOG8917, VOG10223, VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0198, VOG0327, VOG4606, VOG6545, VOG4548, VOG6394, VOG0322, VOG0535, VOG2228 |
Phigaro v2.4.0 (Database: Jan. 2024 release)