Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HKHOOCJH_1 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_2 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_3 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_4 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_5 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_6 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_7 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_8 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_9 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_10 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_11 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_12 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_13 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_14 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_15 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_16 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_17 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_18 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_19 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_20 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_21 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_22 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_23 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_24 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_25 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_26 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_27 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_28 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_29 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_31 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_32 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_33 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_34 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_35 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_36 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_37 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_38 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_39 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_40 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_41 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_42 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_43 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_44 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_46 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_47 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_48 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_49 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_50 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_51 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_52 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_53 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_54 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_55 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_56 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_57 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_58 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_60 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_61 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_62 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_63 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_64 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_65 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_66 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_67 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_68 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_69 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_70 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_71 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_72 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_73 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_75 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_76 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_80 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_82 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_83 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_84 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_85 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_91 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_102 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_113 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_114 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_125 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_136 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_147 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_157 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_168 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_178 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_189 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_199 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_209 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_220 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_221 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_232 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_243 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_254 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_265 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_267 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_268 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_269 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_270 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_271 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_272 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_273 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_274 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_275 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_276 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_277 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_278 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_279 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_280 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_281 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_282 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_283 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_284 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_285 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_286 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_287 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_288 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_289 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_290 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_291 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_292 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_293 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_294 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_295 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_296 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_297 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_298 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_299 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_300 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_301 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_302 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_303 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_304 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_305 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_306 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_307 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_308 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_309 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_310 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_311 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_312 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_313 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_314 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_315 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_316 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_317 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_318 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_319 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_320 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_321 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_322 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_323 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_324 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_325 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_326 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_327 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_328 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_329 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_330 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_331 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_332 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_333 | 1.0 | 0.0 | 1.0 |
| HKHOOCJH_334 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_335 | 0.0 | 1.0 | 0.0 |
| HKHOOCJH_336 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HKHOOCJH_47 | 38714 | 54169 | False | Siphoviridae | VOG0275, |
| HKHOOCJH_80 | 40293 | 50791 | False | Myoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)