Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 0 | 7.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNKOPIDN_185 | 89973 | 90467 | dfrF | ARO:3002867 | dfrF | 100.00 | 100.00 | AF028812.1 |
| BNKOPIDN_185 | 88968 | 89378 | FosXCC | ARO:3003208 | FosXCC | 99.26 | 96.45 | KC876749.1 |
| BNKOPIDN_95 | 2163 | 2900 | ErmB | ARO:3000375 | ErmB | 98.78 | 98.79 | AF242872.1 |
| BNKOPIDN_92 | 1922 | 3841 | tet(O) | ARO:3000190 | tet(O) | 99.69 | 100.00 | M18896.2 |
| BNKOPIDN_58 | 455 | 1894 | AAC(6')-Ie-APH(2'')-Ia bifunctional protein | ARO:3002597 | AAC6_Ie_APH2_Ia | 100.00 | 100.00 | GU565967.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BNKOPIDN_58 | 455 | 1894 | aac(6')-aph(2'') | Gentamicin, Tobramycin, Netilmicin, Kanamycin, Amikacin, Dibekacin, Isepamicin, Fortimicin, Streptomycin | 100.00 | 100.00 | M13771 |
| BNKOPIDN_120 | 44075 | 45325 | cfr(C) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 100.00 | 100.00 | CANB01000378 |
| BNKOPIDN_95 | 2163 | 2900 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | U18931 |
| BNKOPIDN_92 | 1922 | 3841 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.90 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNKOPIDN_58 | 455 | 1891 | aac(6')-Ie/aph(2'')-Ia | bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia | EXACTX | 100.00 | 100.00 | WP_001028144.1 |
| BNKOPIDN_185 | 89976 | 90467 | dfrF | trimethoprim-resistant dihydrofolate reductase DfrF | EXACTX | 100.00 | 100.00 | WP_002322211.1 |
| BNKOPIDN_95 | 2166 | 2900 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | EXACTX | 100.00 | 100.00 | WP_002292226.1 |
| BNKOPIDN_185 | 88968 | 89375 | fosXCC | fosfomycin resistance hydrolase FosXCC | EXACTX | 100.00 | 100.00 | WP_024725385.1 |
| BNKOPIDN_92 | 1925 | 3841 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.84 | 100.00 | WP_011187228.1 |
| BNKOPIDN_120 | 44237 | 45325 | cfr(C) | 23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(C) | BLASTX | 97.25 | 95.78 | WP_111690898.1 |
| BNKOPIDN_180 | 4290 | 4490 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BNKOPIDN_44 | 951 | 2441 | rep1 | 1491 / 1491 | 100.00 | AE016833 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BNKOPIDN_1 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_2 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_3 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_4 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_5 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_6 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_7 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_8 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_9 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_11 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_12 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_13 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_14 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_15 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_16 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_17 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_18 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_19 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_20 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_21 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_22 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_23 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_24 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_25 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_26 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_27 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_28 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_29 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_30 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_31 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_32 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_33 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_34 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_35 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_36 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_37 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_38 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_39 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_40 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_41 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_42 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_43 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_44 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_45 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_46 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_47 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_48 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_49 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_50 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_52 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_53 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_54 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_55 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_56 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_57 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_58 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_59 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_60 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_61 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_62 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_63 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_64 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_65 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_66 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_67 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_68 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_69 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_70 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_71 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_72 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_73 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_74 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_75 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_76 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_77 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_78 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_79 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_81 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_83 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_84 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_86 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_87 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_88 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_89 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_90 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_91 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_92 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_93 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_94 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_95 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_96 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_100 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_101 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_108 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_109 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_110 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_111 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_112 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_113 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_114 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_115 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_116 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_117 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_118 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_119 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_120 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_121 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_122 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_123 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_124 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_125 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_126 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_127 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_128 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_129 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_130 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_131 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_132 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_133 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_134 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_135 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_136 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_137 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_138 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_139 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_140 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_141 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_142 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_143 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_144 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_145 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_146 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_147 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_148 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_149 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_150 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_151 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_152 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_153 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_154 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_155 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_156 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_157 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_158 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_159 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_160 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_161 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_162 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_163 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_164 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_165 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_166 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_167 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_168 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_169 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_170 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_171 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_172 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_173 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_174 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_175 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_176 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_177 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_178 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_179 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_180 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_181 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_182 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_183 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_184 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_185 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_186 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_187 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_188 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_189 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_190 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_191 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_192 | 0.0 | 1.0 | 0.0 |
| BNKOPIDN_193 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_194 | 1.0 | 0.0 | 1.0 |
| BNKOPIDN_195 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)