Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LLILHNAC_1 | 94622 | 95359 | ErmB | ARO:3000375 | ErmB | 98.78 | 98.79 | AF242872.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LLILHNAC_1 | 94622 | 95359 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | X72021 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LLILHNAC_1 | 94625 | 95359 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.59 | 100.00 | WP_001038795.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LLILHNAC_1 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_2 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_3 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_4 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_5 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_6 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_7 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_8 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_9 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_10 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_11 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_12 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_13 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_14 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_15 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_16 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_17 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_18 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_19 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_20 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_21 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_22 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_23 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_24 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_25 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_26 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_27 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_28 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_29 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_30 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_31 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_32 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_33 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_34 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_35 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_36 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_37 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_38 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_39 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_40 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_41 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_42 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_43 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_44 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_45 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_46 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_47 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_48 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_49 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_50 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_51 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_52 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_53 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_54 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_55 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_56 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_57 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_58 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_59 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_60 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_61 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_62 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_63 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_64 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_65 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_66 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_67 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_68 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_69 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_70 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_71 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_72 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_73 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_74 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_75 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_76 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_77 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_78 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_79 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_80 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_81 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_82 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_83 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_84 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_85 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_86 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_88 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_89 | 0.0 | 1.0 | 0.0 |
| LLILHNAC_90 | 1.0 | 0.0 | 1.0 |
| LLILHNAC_91 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LLILHNAC_34 | 64028 | 85630 | False | Siphoviridae | VOG8506, |
| LLILHNAC_55 | 3119 | 14734 | False | Myoviridae | VOG3892, |
Phigaro v2.4.0 (Database: Jan. 2024 release)