Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OPNONDBM_1 | 43498 | 45417 | tet(O) | ARO:3000190 | tet(O) | 98.28 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OPNONDBM_1 | 43498 | 45417 | tet(O) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OPNONDBM_1 | 43498 | 45414 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | EXACTX | 100.00 | 100.00 | WP_000691759.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OPNONDBM_69 | 81457 | 83100 | CdPpiB (CD630_00330) | 0.0 | cyclophilin-type peptidyl-prolyl-cis/trans-isomerase | 80.29 | 100.00 | CAJ66847 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OPNONDBM_1 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_2 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_3 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_4 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_5 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_6 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_7 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_8 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_9 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_11 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_13 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_17 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_18 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_19 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_20 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_21 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_22 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_23 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_24 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_25 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_26 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_27 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_28 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_29 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_30 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_31 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_32 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_33 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_34 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_35 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_36 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_37 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_38 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_39 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_40 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_41 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_42 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_43 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_44 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_45 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_46 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_47 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_48 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_49 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_50 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_51 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_52 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_53 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_54 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_55 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_56 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_57 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_58 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_59 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_60 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_61 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_62 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_63 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_64 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_65 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_66 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_67 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_68 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_69 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_70 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_71 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_72 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_73 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_74 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_75 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_76 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_77 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_78 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_79 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_80 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_81 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_82 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_83 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_84 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_85 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_86 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_87 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_88 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_89 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_90 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_91 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_92 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_93 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_94 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_95 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_96 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_97 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_98 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_99 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_100 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_101 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_102 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_103 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_104 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_105 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_106 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_107 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_108 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_109 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_110 | 0.0 | 1.0 | 0.0 |
| OPNONDBM_111 | 1.0 | 0.0 | 1.0 |
| OPNONDBM_112 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OPNONDBM_19 | 63088 | 71305 | True | Unknown | VOG0221, |
Phigaro v2.4.0 (Database: Jan. 2024 release)