Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JHOIOKDK_152 | 10182 | 9478 | WalR | 1.35e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| JHOIOKDK_154 | 77037 | 76843 | CspR | 3.70e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| JHOIOKDK_154 | 77037 | 76840 | CspA | 5.68e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JHOIOKDK_1 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_2 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_3 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_4 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_5 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_6 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_7 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_8 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_9 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_10 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_11 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_12 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_13 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_14 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_15 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_16 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_17 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_18 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_19 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_20 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_21 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_22 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_23 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_24 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_25 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_26 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_27 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_28 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_29 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_30 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_31 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_32 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_33 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_34 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_35 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_36 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_37 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_38 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_39 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_40 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_41 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_42 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_43 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_44 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_45 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_46 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_47 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_48 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_49 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_50 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_51 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_52 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_53 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_54 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_55 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_56 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_57 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_58 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_59 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_60 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_61 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_62 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_63 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_64 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_65 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_66 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_67 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_68 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_70 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_71 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_72 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_73 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_74 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_75 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_76 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_77 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_78 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_79 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_80 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_81 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_82 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_83 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_85 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_86 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_88 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_91 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_92 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_93 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_94 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_95 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_96 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_97 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_98 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_99 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_101 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_110 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_111 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_122 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_123 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_124 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_125 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_126 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_127 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_128 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_129 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_130 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_131 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_132 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_133 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_134 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_135 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_136 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_137 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_138 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_139 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_140 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_141 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_142 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_143 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_144 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_145 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_146 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_147 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_148 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_149 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_150 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_151 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_152 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_153 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_154 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_155 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_156 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_157 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_158 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_159 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_160 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_161 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_162 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_163 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_164 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_165 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_166 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_167 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_168 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_169 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_170 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_171 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_172 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_173 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_174 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_175 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_176 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_177 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_178 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_179 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_180 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_181 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_182 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_183 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_184 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_185 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_186 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_187 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_188 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_189 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_190 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_191 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_192 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_193 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_194 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_195 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_196 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_197 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_198 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_199 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_200 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_201 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_202 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_203 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_204 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_205 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_206 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_207 | 0.0 | 1.0 | 0.0 |
| JHOIOKDK_208 | 1.0 | 0.0 | 1.0 |
| JHOIOKDK_209 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JHOIOKDK_55 | 3485 | 18020 | False | Siphoviridae | VOG6163, VOG0725, VOG0799, VOG0724, VOG9583, VOG4713, VOG1329, VOG10914, VOG4564, VOG0720, VOG10227, VOG0796, VOG1183, VOG8614 |
| JHOIOKDK_129 | 31509 | 37102 | False | Siphoviridae | VOG3711, VOG3459, VOG0650, VOG0685, VOG0322, VOG0514, VOG7318 |
| JHOIOKDK_152 | 10795 | 18679 | False | Siphoviridae | VOG5335, VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581 |
| JHOIOKDK_155 | 2969 | 16436 | False | Siphoviridae | VOG5904, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4568, VOG4556, VOG6939, VOG1886 |
Phigaro v2.4.0 (Database: Jan. 2024 release)