Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MMEKMEFK_10 | 22946 | 22245 | WalR | 5.16e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MMEKMEFK_1 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_2 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_3 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_4 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_5 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_6 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_7 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_8 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_9 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_10 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_11 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_12 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_13 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_14 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_15 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_16 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_17 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_18 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_19 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_20 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_21 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_22 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_23 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_24 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_25 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_26 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_27 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_28 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_29 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_30 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_32 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_33 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_34 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_35 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_36 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_37 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_38 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_39 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_40 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_41 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_42 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_43 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_44 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_45 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_47 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_48 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_49 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_50 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_51 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_52 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_53 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_54 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_55 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_56 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_57 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_58 | 1.0 | 0.0 | 1.0 |
| MMEKMEFK_59 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_66 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_69 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_70 | 0.0 | 1.0 | 0.0 |
| MMEKMEFK_71 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MMEKMEFK_6 | 42368 | 53586 | False | Siphoviridae | VOG4632, VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4553, VOG0204, VOG0198 |
| MMEKMEFK_7 | 4583 | 33975 | False | Myoviridae | VOG0861, VOG7896, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG8263, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG2779, VOG1915, VOG4865, VOG4564, VOG1912, VOG10227, VOG0796, VOG4214, VOG7145, VOG0198 |
| MMEKMEFK_7 | 35086 | 38128 | False | Unknown | VOG4693, VOG7236, VOG4855 |
| MMEKMEFK_8 | 11960 | 41696 | False | Siphoviridae | VOG0283, VOG0226, VOG0514, VOG4566, VOG4673, VOG0044, VOG3643, VOG0198, VOG4737, VOG4544, VOG0720, VOG7038, VOG4564, VOG4555, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498, VOG9955, VOG5318, VOG4705, VOG0703 |
| MMEKMEFK_9 | 12362 | 41176 | False | Myoviridae | VOG4799, VOG0189, VOG0052, VOG0044, VOG5733, VOG0149, VOG0198, VOG0045, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG1353, VOG1883, VOG1352, VOG4699, VOG6684, VOG5904, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845 |
Phigaro v2.4.0 (Database: Jan. 2024 release)