Probiotic potential risk score


ARGs VFs PGs PPRS
0303.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
BNPEJMEF_171956020526STR_RS052200.0CapsuleImmune modulation94.8599.28WP_011227240
BNPEJMEF_171635217419STR_RS052150.0CapsuleImmune modulation94.3898.61WP_011227239
BNPEJMEF_172053221011STR_RS052250.0CapsuleImmune modulation93.54100.00WP_041827041

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
BNPEJMEF_10.01.00.0
BNPEJMEF_20.01.00.0
BNPEJMEF_30.01.00.0
BNPEJMEF_40.01.00.0
BNPEJMEF_50.01.00.0
BNPEJMEF_61.00.01.0
BNPEJMEF_70.01.00.0
BNPEJMEF_80.01.00.0
BNPEJMEF_90.01.00.0
BNPEJMEF_100.01.00.0
BNPEJMEF_110.01.00.0
BNPEJMEF_121.00.01.0
BNPEJMEF_130.01.00.0
BNPEJMEF_141.00.01.0
BNPEJMEF_150.01.00.0
BNPEJMEF_160.01.00.0
BNPEJMEF_171.00.01.0
BNPEJMEF_181.00.01.0
BNPEJMEF_190.01.00.0
BNPEJMEF_201.00.01.0
BNPEJMEF_211.00.01.0
BNPEJMEF_220.01.00.0
BNPEJMEF_231.00.01.0
BNPEJMEF_240.01.00.0
BNPEJMEF_250.01.00.0
BNPEJMEF_260.01.00.0
BNPEJMEF_271.00.01.0
BNPEJMEF_281.00.01.0
BNPEJMEF_290.01.00.0
BNPEJMEF_301.00.01.0
BNPEJMEF_330.01.00.0
BNPEJMEF_350.01.00.0
BNPEJMEF_360.01.00.0
BNPEJMEF_370.01.00.0
BNPEJMEF_380.01.00.0
BNPEJMEF_390.01.00.0
BNPEJMEF_400.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
BNPEJMEF_12650334916FalseMyoviridaeVOG0514, VOG4566, VOG0189, VOG1931, VOG3480, VOG0149, VOG0586, VOG0198, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG1353, VOG1883, VOG1352, VOG4699, VOG5904, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845
BNPEJMEF_22226401260842FalseMyoviridaeVOG1309, VOG0186, VOG4855, VOG7236, VOG4693, VOG0341, VOG0198, VOG5840, VOG6083, VOG0796, VOG4544, VOG10904, VOG10227, VOG1912, VOG4564, VOG4918, VOG1915, VOG2779, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG4910, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements