Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CKFONANA_2 | 260135 | 260839 | WalR | 1.68e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| CKFONANA_8 | 6954 | 7148 | CspR | 4.20e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| CKFONANA_8 | 6954 | 7151 | CspA | 6.45e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| CKFONANA_1 | 2999 | 3955 | repUS64 | 959 / 954 | 85.09 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CKFONANA_1 | 1.0 | 0.0 | 1.0 |
| CKFONANA_2 | 0.0 | 1.0 | 0.0 |
| CKFONANA_3 | 0.0 | 1.0 | 0.0 |
| CKFONANA_4 | 0.0 | 1.0 | 0.0 |
| CKFONANA_5 | 0.0 | 1.0 | 0.0 |
| CKFONANA_6 | 0.0 | 1.0 | 0.0 |
| CKFONANA_7 | 0.0 | 1.0 | 0.0 |
| CKFONANA_8 | 0.0 | 1.0 | 0.0 |
| CKFONANA_9 | 0.0 | 1.0 | 0.0 |
| CKFONANA_10 | 0.0 | 1.0 | 0.0 |
| CKFONANA_11 | 0.0 | 1.0 | 0.0 |
| CKFONANA_12 | 0.0 | 1.0 | 0.0 |
| CKFONANA_13 | 0.0 | 1.0 | 0.0 |
| CKFONANA_14 | 0.0 | 1.0 | 0.0 |
| CKFONANA_15 | 0.0 | 1.0 | 0.0 |
| CKFONANA_16 | 0.0 | 1.0 | 0.0 |
| CKFONANA_17 | 0.0 | 1.0 | 0.0 |
| CKFONANA_18 | 0.0 | 1.0 | 0.0 |
| CKFONANA_19 | 0.0 | 1.0 | 0.0 |
| CKFONANA_20 | 0.0 | 1.0 | 0.0 |
| CKFONANA_21 | 0.0 | 1.0 | 0.0 |
| CKFONANA_22 | 0.0 | 1.0 | 0.0 |
| CKFONANA_23 | 0.0 | 1.0 | 0.0 |
| CKFONANA_24 | 0.0 | 1.0 | 0.0 |
| CKFONANA_25 | 0.0 | 1.0 | 0.0 |
| CKFONANA_26 | 0.0 | 1.0 | 0.0 |
| CKFONANA_27 | 0.0 | 1.0 | 0.0 |
| CKFONANA_28 | 0.0 | 1.0 | 0.0 |
| CKFONANA_29 | 0.0 | 1.0 | 0.0 |
| CKFONANA_30 | 0.0 | 1.0 | 0.0 |
| CKFONANA_31 | 0.0 | 1.0 | 0.0 |
| CKFONANA_32 | 0.0 | 1.0 | 0.0 |
| CKFONANA_33 | 0.0 | 1.0 | 0.0 |
| CKFONANA_34 | 0.0 | 1.0 | 0.0 |
| CKFONANA_35 | 0.0 | 1.0 | 0.0 |
| CKFONANA_36 | 0.0 | 1.0 | 0.0 |
| CKFONANA_37 | 0.0 | 1.0 | 0.0 |
| CKFONANA_38 | 0.0 | 1.0 | 0.0 |
| CKFONANA_39 | 0.0 | 1.0 | 0.0 |
| CKFONANA_40 | 1.0 | 0.0 | 1.0 |
| CKFONANA_41 | 0.0 | 1.0 | 0.0 |
| CKFONANA_42 | 1.0 | 0.0 | 1.0 |
| CKFONANA_43 | 0.0 | 1.0 | 0.0 |
| CKFONANA_44 | 0.0 | 1.0 | 0.0 |
| CKFONANA_45 | 0.0 | 1.0 | 0.0 |
| CKFONANA_46 | 1.0 | 0.0 | 1.0 |
| CKFONANA_47 | 1.0 | 0.0 | 1.0 |
| CKFONANA_48 | 0.0 | 1.0 | 0.0 |
| CKFONANA_49 | 0.0 | 1.0 | 0.0 |
| CKFONANA_50 | 0.0 | 1.0 | 0.0 |
| CKFONANA_51 | 1.0 | 0.0 | 1.0 |
| CKFONANA_52 | 1.0 | 0.0 | 1.0 |
| CKFONANA_53 | 1.0 | 0.0 | 1.0 |
| CKFONANA_54 | 0.0 | 1.0 | 0.0 |
| CKFONANA_55 | 1.0 | 0.0 | 1.0 |
| CKFONANA_56 | 0.0 | 1.0 | 0.0 |
| CKFONANA_57 | 0.0 | 1.0 | 0.0 |
| CKFONANA_58 | 1.0 | 0.0 | 1.0 |
| CKFONANA_59 | 0.0 | 1.0 | 0.0 |
| CKFONANA_60 | 1.0 | 0.0 | 1.0 |
| CKFONANA_61 | 0.0 | 1.0 | 0.0 |
| CKFONANA_62 | 1.0 | 0.0 | 1.0 |
| CKFONANA_63 | 1.0 | 0.0 | 1.0 |
| CKFONANA_64 | 1.0 | 0.0 | 1.0 |
| CKFONANA_65 | 1.0 | 0.0 | 1.0 |
| CKFONANA_67 | 0.0 | 1.0 | 0.0 |
| CKFONANA_68 | 0.0 | 1.0 | 0.0 |
| CKFONANA_69 | 1.0 | 0.0 | 1.0 |
| CKFONANA_70 | 1.0 | 0.0 | 1.0 |
| CKFONANA_71 | 1.0 | 0.0 | 1.0 |
| CKFONANA_72 | 1.0 | 0.0 | 1.0 |
| CKFONANA_73 | 1.0 | 0.0 | 1.0 |
| CKFONANA_75 | 1.0 | 0.0 | 1.0 |
| CKFONANA_76 | 1.0 | 0.0 | 1.0 |
| CKFONANA_77 | 1.0 | 0.0 | 1.0 |
| CKFONANA_78 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CKFONANA_4 | 62215 | 86795 | False | Siphoviridae | VOG10015, VOG9671, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0660, VOG4605, VOG4599 |
| CKFONANA_21 | 15338 | 45464 | False | Siphoviridae | VOG4566, VOG2591, VOG4693, VOG0198, VOG0045, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498 |
| CKFONANA_30 | 2728 | 23394 | False | Siphoviridae | VOG0602, VOG1637, VOG8917, VOG9997, VOG3498, VOG4763, VOG4619, VOG0801, VOG6163, VOG0541, VOG7168, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844, VOG6154 |
| CKFONANA_30 | 27475 | 32971 | False | Siphoviridae | VOG4609, VOG4632, VOG6545, VOG0322, VOG9667, VOG4548 |
Phigaro v2.4.0 (Database: Jan. 2024 release)