Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EBNOGNPH_46 | 33870 | 34067 | CspA | 9.08e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| EBNOGNPH_46 | 33870 | 34064 | CspR | 7.73e-28 | cold shock protein | 83.08 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EBNOGNPH_1 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_2 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_3 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_4 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_5 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_6 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_7 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_8 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_9 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_10 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_11 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_12 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_13 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_14 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_15 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_16 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_17 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_18 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_19 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_20 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_21 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_22 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_24 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_25 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_26 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_27 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_28 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_29 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_30 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_31 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_32 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_33 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_34 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_35 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_36 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_37 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_38 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_39 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_40 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_41 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_42 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_43 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_44 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_45 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_46 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_47 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_48 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_49 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_50 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_57 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_68 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_79 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_90 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_101 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_112 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_113 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_124 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_135 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_140 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_141 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_142 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_143 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_144 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_145 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_146 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_147 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_148 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_149 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_150 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_151 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_152 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_153 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_154 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_155 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_156 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_157 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_158 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_159 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_160 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_161 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_162 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_163 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_164 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_165 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_166 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_167 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_168 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_169 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_170 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_171 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_172 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_173 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_174 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_175 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_176 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_177 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_178 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_179 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_180 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_181 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_182 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_183 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_184 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_185 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_186 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_187 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_188 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_189 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_190 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_191 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_192 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_193 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_194 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_195 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_196 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_197 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_198 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_199 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_200 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_201 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_202 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_203 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_204 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_205 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_206 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_207 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_208 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_209 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_210 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_211 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_212 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_213 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_214 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_215 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_216 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_217 | 0.0 | 1.0 | 0.0 |
| EBNOGNPH_218 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_219 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_220 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_221 | 1.0 | 0.0 | 1.0 |
| EBNOGNPH_222 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EBNOGNPH_145 | 6787 | 25911 | False | Siphoviridae | VOG9502, VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4571, VOG4581, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021 |
| EBNOGNPH_150 | 17471 | 18611 | False | Siphoviridae | VOG10649, VOG0181 |
Phigaro v2.4.0 (Database: Jan. 2024 release)