Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MNJDGMKE_4 | 139389 | 138685 | WalR | 1.10e-114 | transcriptional regulatory protein | 83.83 | 100.00 | EPH95667 |
| MNJDGMKE_6 | 3094 | 2900 | CspR | 5.69e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| MNJDGMKE_6 | 3094 | 2897 | CspA | 8.73e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MNJDGMKE_1 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_2 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_3 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_4 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_5 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_6 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_7 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_8 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_9 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_10 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_11 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_12 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_13 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_14 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_15 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_16 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_17 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_18 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_19 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_20 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_21 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_22 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_23 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_24 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_25 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_26 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_27 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_28 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_29 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_30 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_31 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_32 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_33 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_34 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_35 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_36 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_37 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_38 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_39 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_40 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_41 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_42 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_43 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_44 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_45 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_46 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_47 | 1.0 | 0.0 | 1.0 |
| MNJDGMKE_48 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_49 | 1.0 | 0.0 | 1.0 |
| MNJDGMKE_50 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_51 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_52 | 1.0 | 0.0 | 1.0 |
| MNJDGMKE_53 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_54 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_55 | 1.0 | 0.0 | 1.0 |
| MNJDGMKE_56 | 0.0 | 1.0 | 0.0 |
| MNJDGMKE_57 | 1.0 | 0.0 | 1.0 |
| MNJDGMKE_61 | 1.0 | 0.0 | 1.0 |
| MNJDGMKE_62 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MNJDGMKE_7 | 18388 | 44102 | False | Siphoviridae | VOG10957, VOG4599, VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4568, VOG4556, VOG6939, VOG1886, VOG4581, VOG4841, VOG0198, VOG4799 |
| MNJDGMKE_18 | 33890 | 57569 | False | Siphoviridae | VOG10116, VOG7529, VOG0044, VOG0044, VOG3643, VOG1049, VOG0198, VOG7742, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG4711, VOG4713, VOG1320, VOG5660, VOG1321, VOG0799, VOG0725, VOG1323, VOG0801, VOG4619, VOG8438, VOG9640 |
| MNJDGMKE_31 | 653 | 22159 | False | Siphoviridae | VOG3699, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG9583, VOG0724, VOG0799, VOG0725, VOG6163, VOG4633, VOG4599, VOG4619, VOG4856, VOG9640, VOG0804, VOG4705, VOG4918, VOG0753, VOG0054 |
Phigaro v2.4.0 (Database: Jan. 2024 release)