Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ALGCJAAL_117 | 95514 | 94810 | WalR | 9.33e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| ALGCJAAL_83 | 14718 | 14915 | CspR | 6.36e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ALGCJAAL_1 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_2 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_3 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_4 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_5 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_6 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_7 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_8 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_9 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_10 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_11 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_12 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_13 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_14 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_24 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_35 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_46 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_57 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_68 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_79 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_82 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_83 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_84 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_85 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_86 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_87 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_88 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_89 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_90 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_91 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_92 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_93 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_94 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_95 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_96 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_97 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_98 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_99 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_100 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_101 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_102 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_103 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_104 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_105 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_106 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_107 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_108 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_109 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_110 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_111 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_112 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_113 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_114 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_115 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_116 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_117 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_118 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_119 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_120 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_121 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_122 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_123 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_124 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_125 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_126 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_127 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_128 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_129 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_130 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_131 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_132 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_133 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_134 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_135 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_136 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_137 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_138 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_139 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_140 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_141 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_142 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_143 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_144 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_145 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_147 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_148 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_149 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_150 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_151 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_152 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_153 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_154 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_155 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_156 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_157 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_158 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_159 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_160 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_161 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_162 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_164 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_165 | 0.0 | 1.0 | 0.0 |
| ALGCJAAL_166 | 1.0 | 0.0 | 1.0 |
| ALGCJAAL_167 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ALGCJAAL_83 | 35227 | 41944 | False | Siphoviridae | VOG8241, VOG1309, VOG0186, VOG4566, VOG6238, VOG1638, VOG11003, VOG9860, VOG0536, VOG0822, VOG9741 |
| ALGCJAAL_106 | 10971 | 20417 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632 |
Phigaro v2.4.0 (Database: Jan. 2024 release)