Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DDOPHCAG_202 | 8365 | 7664 | WalR | 4.27e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DDOPHCAG_25 | 6223 | 7152 | rep28 | 930 / 930 | 98.49 | CP003162 |
| DDOPHCAG_216 | 144 | 1280 | rep32 | 1154 / 1161 | 81.89 | AL592102 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DDOPHCAG_1 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_2 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_5 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_8 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_10 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_13 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_15 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_16 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_17 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_18 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_19 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_21 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_22 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_23 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_24 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_25 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_26 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_27 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_29 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_30 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_31 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_32 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_33 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_34 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_35 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_36 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_37 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_38 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_39 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_41 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_44 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_45 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_47 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_49 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_50 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_51 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_56 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_60 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_62 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_63 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_64 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_66 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_68 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_72 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_75 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_81 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_82 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_87 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_88 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_89 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_96 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_97 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_101 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_103 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_106 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_112 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_113 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_121 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_123 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_125 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_127 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_131 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_132 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_141 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_145 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_148 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_153 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_154 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_157 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_160 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_161 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_164 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_168 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_169 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_174 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_176 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_178 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_180 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_182 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_183 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_184 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_185 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_187 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_190 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_191 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_193 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_194 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_195 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_196 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_198 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_199 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_200 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_201 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_202 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_203 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_204 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_206 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_207 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_209 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_211 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_212 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_213 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_214 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_215 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_216 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_217 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_220 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_221 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_222 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_223 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_224 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_225 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_226 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_227 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_229 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_230 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_231 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_233 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_235 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_237 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_238 | 1.0 | 0.0 | 1.0 |
| DDOPHCAG_239 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_240 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_241 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_242 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_243 | 0.0 | 1.0 | 0.0 |
| DDOPHCAG_244 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DDOPHCAG_62 | 4465 | 17046 | False | Siphoviridae | VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG9295, VOG0198, VOG4732, VOG5393, VOG0189, VOG4799 |
| DDOPHCAG_182 | 2714 | 32690 | False | Myoviridae | VOG3298, VOG3298, VOG10914, VOG4845, VOG4691, VOG0573, VOG1348, VOG1433, VOG1956, VOG4910, VOG5706, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4710, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0275, VOG0796, VOG5446 |
Phigaro v2.4.0 (Database: Jan. 2024 release)